RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 GBP3Q9H0R5 595 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 ZSWIM4Q9H7M6 989 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 NRDE2Q9H7Z3 1164 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 BRMS1Q9HCU9 246 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 XPNPEP1Q9NQW7 623 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 CHST12Q9NRB3 414 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 FAM105AQ9NUU6 356 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 DACT1Q9NYF0 836 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 DNAJB4Q9UDY4 337 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 PUF60Q9UHX1 559 aaKnown RBP9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
AC012494.1-201ENST00000439259 OFD1O75665 1012 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 ALADP13716 330 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 SP100P23497 879 aaPredicted RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 TECP42680 631 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 ALDH7A1P49419 539 aaKnown RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 KRT17Q04695 432 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 KCNC3Q14003 757 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 TUSC1Q2TAM9 212 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 NOMO2Q5JPE7 1267 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 SYCE2Q6PIF2 218 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 OTUD6AQ7L8S5 288 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 CCDC83Q8IWF9 413 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 VPS52Q8N1B4 723 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 FEZF2Q8TBJ5 459 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 ASAP3Q8TDY4 903 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 PIGOQ8TEQ8 1089 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 PSPC1Q8WXF1 523 aaKnown RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 BAP1Q92560 729 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 RPGRIP1Q96KN7 1286 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 NAP1L4Q99733 375 aaKnown RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 HSD17B14Q9BPX1 270 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 JPH2Q9BR39 696 aaPredicted RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 INO80BQ9C086 356 aaPredicted RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 S1PR5Q9H228 398 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 TTC12Q9H892 705 aaPredicted RBP9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 TBC1D13Q9NVG8 400 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 PCDHA12Q9UN75 941 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 PCDHB2Q9Y5E7 798 aa9.04□□□□□ -0.96
AC012494.1-201ENST00000439259 C2orf71A6NGG8 1288 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 PRR33A8MZF0 331 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 NEMFO60524 1076 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 DKC1O60832 514 aaKnown RBP eCLIP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 ZNF623O75123 536 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 DDHD2O94830 711 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 CXCL14O95715 111 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 POMCP01189 267 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 GALTP07902 379 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 MCM7P33993 719 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 PPM1AP35813 382 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 RFC5P40937 340 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 SLC11A1P49279 550 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 TRIM29Q14134 588 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 ANKRD54Q6NXT1 300 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 GLB1LQ6UWU2 654 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 SRGAP1Q7Z6B7 1085 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 CDR2LQ86X02 465 aaPredicted RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 SUSD6Q92537 303 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 TMEM169Q96HH4 297 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 MTMR9Q96QG7 549 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 CDCA3Q99618 268 aaPredicted RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 VN1R3Q9BXE9 311 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 EIF2AQ9BY44 585 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 MRPL9Q9BYD2 267 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 NGRNQ9NPE2 291 aaKnown RBP9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 HES2Q9Y543 173 aa9.03□□□□□ -0.96
AC012494.1-201ENST00000439259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 LOC730098B7Z3J9 87 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 INO80B-WBP1J3KQ70 363 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 B4GALT5O43286 388 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 WIPF1O43516 503 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 TSPAN1O60635 241 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 MED24O75448 989 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 CTHP32929 405 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 PLA2G5P39877 138 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 CAPSQ13938 189 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 ZNF174Q15697 407 aa9.02□□□□□ -0.97
AC012494.1-201ENST00000439259 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms