RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MTCL1Q9Y4B5 1905 aaKnown RBP13.92□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 TMEM8BA6NDV4 472 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 POMCP01189 267 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 KIF5BP33176 963 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 CCR3P51677 355 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 DSG1Q02413 1049 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 GAS6Q14393 721 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 ZNF454Q8N9F8 522 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 TMEM175Q9BSA9 504 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 LMAN1LQ9HAT1 526 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 SSX2IPQ9Y2D8 614 aa13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 MRPS17Q9Y2R5 130 aaKnown RBP13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 MAFBQ9Y5Q3 323 aaPredicted RBP13.91□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 MAGEB2O15479 319 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 ZNF806P0C7X5 589 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 CXCL12P48061 93 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 NOVA1P51513 510 aaKnown RBP13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 DRP2Q13474 957 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 PPP2R5DQ14738 602 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 IMMTQ16891 758 aaKnown RBP13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 MIS18BP1Q6P0N0 1132 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 FAM193BQ96PV7 902 aaPredicted RBP13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 CNNM2Q9H8M5 875 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 GREB1Q4ZG55 1949 aa13.9□□□□□ -0.18
SMAD9-IT1-201ENST00000437983 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CCL16O15467 120 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 ZNF623O75123 536 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 TMOD1P28289 359 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 OR1G1P47890 313 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PDE1AP54750 535 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 ZNF252P-AS1Q0IIN9 211 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CEP55Q53EZ4 464 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CEP68Q76N32 757 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 NPAS3Q8IXF0 933 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 ING5Q8WYH8 240 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 LY9Q9HBG7 655 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CHST7Q9NS84 486 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 C2orf42Q9NWW7 574 aa13.89□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 K7ESF4 209 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 MEIS1O00470 390 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SDSP20132 328 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 MCM6Q14566 821 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 LONP2Q86WA8 852 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 COLGALT2Q8IYK4 626 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 HCFC1R1Q9NWW0 138 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 POLIQ9UNA4 740 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PCDHB2Q9Y5E7 798 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 LAMA1P25391 3075 aa13.88□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 A0A087WZ62 844 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 NRG2O14511 850 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SKIP12755 728 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CNR2P34972 360 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 GRM2Q14416 872 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 TANGO2Q6ICL3 276 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 TCEAL6Q6IPX3 200 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 C19orf48Q6RUI8 117 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CWC27Q6UX04 472 aaKnown RBP13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 TCEAL3Q969E4 200 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 MCRS1Q96EZ8 462 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 MBOAT7Q96N66 472 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 FDXACB1Q9BRP7 624 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 GPR62Q9BZJ7 368 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 GABBR1Q9UBS5 961 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CEP131Q9UPN4 1083 aa13.87□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 NOTCH4Q99466 2003 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 ZNF862O60290 1169 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 ECI2O75521 394 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 C1RP00736 705 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 NUDT7P0C024 238 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 CHRNB1P11230 501 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 RNF43Q68DV7 783 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PRSS55Q6UWB4 352 aaPredicted RBP13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 FAM3CQ92520 227 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 FBXW11Q9UKB1 542 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
SMAD9-IT1-201ENST00000437983 BPTFQ12830 3046 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms