RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TARSL2A2RTX5 802 aaKnown RBP27.79■■■□□ 2.04
CPNE1-216ENST00000437340 LRRIQ4A6NIV6 560 aa27.79■■■□□ 2.04
CPNE1-216ENST00000437340 NOP56O00567 594 aaKnown RBP27.79■■■□□ 2.04
CPNE1-216ENST00000437340 ERLIN1O75477 346 aa27.79■■■□□ 2.04
CPNE1-216ENST00000437340 TNFAIP3P21580 790 aa27.79■■■□□ 2.04
CPNE1-216ENST00000437340 MFAP3P55082 362 aa27.79■■■□□ 2.04
CPNE1-216ENST00000437340 LMBR1Q8WVP7 490 aa27.79■■■□□ 2.04
CPNE1-216ENST00000437340 NCK2O43639 380 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 LRRN2O75325 713 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 SLC10A3P09131 477 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 MCM3P25205 808 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 SLC26A2P50443 739 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 CLDN10P78369 228 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 WDR78Q5VTH9 848 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 PSPC1Q8WXF1 523 aaKnown RBP27.78■■■□□ 2.04
CPNE1-216ENST00000437340 AGPAT1Q99943 283 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 FAM213AQ9BRX8 229 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 TMEM253P0C7T8 217 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 PAFAH1B1P43034 410 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 PSMD6Q15008 389 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 IER5Q5VY09 327 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 MMGT1Q8N4V1 131 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 GPRC5AQ8NFJ5 357 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 ATP8B4Q8TF62 1192 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 GLG1Q92896 1179 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 FAM81BQ96LP2 452 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 RAB20Q9NX57 234 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 PLXNB2O15031 1838 aa27.78■■■□□ 2.04
CPNE1-216ENST00000437340 SIP14410 1827 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 ADCY3O60266 1144 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 ZC3H11AO75152 810 aaKnown RBP eCLIP27.77■■■□□ 2.04
CPNE1-216ENST00000437340 LDHAP00338 332 aaKnown RBP27.77■■■□□ 2.04
CPNE1-216ENST00000437340 GALCP54803 685 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 HSDL1Q3SXM5 330 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 CCDC181Q5TID7 509 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 SV2AQ7L0J3 742 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 FBXO16Q8IX29 292 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-216ENST00000437340 DHX37Q8IY37 1157 aaKnown RBP27.77■■■□□ 2.04
CPNE1-216ENST00000437340 FAM71AQ8IYT1 594 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 LRRC57Q8N9N7 239 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 SEMA4DQ92854 862 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 NCANO14594 1321 aa27.77■■■□□ 2.04
CPNE1-216ENST00000437340 CES2O00748 559 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 TOMM70O94826 608 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 NOP2P46087 812 aaKnown RBP27.76■■■□□ 2.03
CPNE1-216ENST00000437340 TTLL4Q14679 1199 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 TPCN2Q8NHX9 752 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 TCP11Q8WWU5 503 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 SHC3Q92529 594 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 NT5C1BQ96P26 610 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 POP1Q99575 1024 aaKnown RBP27.76■■■□□ 2.03
CPNE1-216ENST00000437340 AGO2Q9UKV8 859 aaKnown RBP27.76■■■□□ 2.03
CPNE1-216ENST00000437340 ABT1Q9ULW3 272 aaKnown RBP27.76■■■□□ 2.03
CPNE1-216ENST00000437340 SPDYE4A6NLX3 237 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 FTCDO95954 541 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 EFNA5P52803 228 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 CAPSQ13938 189 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 CFAP221Q4G0U5 840 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 C15orf39Q6ZRI6 1047 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 KRT222Q8N1A0 295 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 TAS1R2Q8TE23 839 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 SPATA33Q96N06 139 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 EFCC1Q9HA90 598 aa27.76■■■□□ 2.03
CPNE1-216ENST00000437340 MANSC4A6NHS7 340 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 FAM155AB1AL88 458 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 SEC31AO94979 1220 aaKnown RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 CCDC70Q6NSX1 233 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 ENOSF1Q7L5Y1 443 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 SLFN11Q7Z7L1 901 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 SYCE1Q8N0S2 351 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 PPM1KQ8N3J5 372 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 SPATA4Q8NEY3 305 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 HELQQ8TDG4 1101 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 SCFD2Q8WU76 684 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 RFFLQ8WZ73 363 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 KREMEN1Q96MU8 473 aa27.75■■■□□ 2.03
CPNE1-216ENST00000437340 PARK7Q99497 189 aaKnown RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 JPH2Q9BR39 696 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 DIS3Q9Y2L1 958 aaKnown RBP27.75■■■□□ 2.03
CPNE1-216ENST00000437340 IGKV6-21A0A0C4DH24 114 aa27.74■■■□□ 2.03
CPNE1-216ENST00000437340 TMEM88BA6NKF7 163 aa27.74■■■□□ 2.03
CPNE1-216ENST00000437340 IGF2BP3O00425 579 aaKnown RBP eCLIP27.74■■■□□ 2.032e-7■■■■□ 22.5
CPNE1-216ENST00000437340 DLATP10515 647 aaKnown RBP27.74■■■□□ 2.03
CPNE1-216ENST00000437340 TXNP10599 105 aaKnown RBP27.74■■■□□ 2.03
CPNE1-216ENST00000437340 CXCR5P32302 372 aa27.74■■■□□ 2.03
CPNE1-216ENST00000437340 LONRF2Q1L5Z9 754 aa27.74■■■□□ 2.03
CPNE1-216ENST00000437340 ABRAQ8N0Z2 381 aa27.74■■■□□ 2.03
CPNE1-216ENST00000437340 CTNNBL1Q8WYA6 563 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-216ENST00000437340 TOPORSQ9NS56 1045 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-216ENST00000437340 A0A0B4J269 797 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 ANKRD62A6NC57 917 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 TBC1D8O95759 1140 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 GCLCP48506 637 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 VSNL1P62760 191 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 MXD4Q14582 209 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 ZPBP2Q6X784 338 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 RUBCNQ92622 972 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 KAT5Q92993 513 aa27.73■■■□□ 2.03
CPNE1-216ENST00000437340 CALR3Q96L12 384 aaKnown RBP27.73■■■□□ 2.03
CPNE1-216ENST00000437340 FNBP1Q96RU3 617 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms