RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 COG4Q9H9E3 785 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS8-207ENST00000436792 PRR23AA6NEV1 266 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ZNF202O95125 648 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 NPTXRO95502 500 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 NTSR2O95665 410 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ALPPL2P10696 532 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 PSMA2P25787 234 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ELF2Q15723 593 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ZNF284Q2VY69 593 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 LONRF3Q496Y0 759 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 SYCP2LQ5T4T6 812 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 TRIM42Q8IWZ5 723 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ADGRF4Q8IZF3 695 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 CD99L2Q8TCZ2 262 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 SYMPKQ92797 1274 aaKnown RBP9.7□□□□□ -0.86
VPS8-207ENST00000436792 ARHGEF26Q96DR7 871 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 ATXN3LQ9H3M9 355 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 NDFIP2Q9NV92 336 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 KCND2Q9NZV8 630 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 AGAP1Q9UPQ3 857 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 FAM47DPA6NHR8 397 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 MX2P20592 715 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 DEUP1Q05D60 604 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS8-207ENST00000436792 TAF1BQ53T94 588 aaPredicted RBP9.7□□□□□ -0.86
VPS8-207ENST00000436792 CYB5D1Q6P9G0 228 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 CCDC186Q7Z3E2 898 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 SPATA18Q8TC71 538 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 MOV10L1Q9BXT6 1211 aaKnown RBP9.7□□□□□ -0.86
VPS8-207ENST00000436792 SIK2Q9H0K1 926 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 TRMT1Q9NXH9 659 aaKnown RBP9.7□□□□□ -0.86
VPS8-207ENST00000436792 MTMR4Q9NYA4 1195 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.7□□□□□ -0.86
VPS8-207ENST00000436792 SNX9Q9Y5X1 595 aa9.7□□□□□ -0.86
VPS8-207ENST00000436792 SHROOM2Q13796 1616 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 UNCXA6NJT0 531 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 CREB3O43889 395 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 GUCA1AP43080 201 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 PSEN2P49810 448 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 PRAMEP78395 509 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TAP1Q03518 808 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 MFSD10Q14728 455 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 CFAP221Q4G0U5 840 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 SZRD1Q7Z422 152 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 BAG1Q99933 345 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 FAM213AQ9BRX8 229 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 ASCC2Q9H1I8 757 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS8-207ENST00000436792 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 PCDHGB4Q9UN71 923 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TBX3O15119 743 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TBC1D12O60347 775 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 HNRNPH2P55795 449 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS8-207ENST00000436792 SUZ12Q15022 739 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 ATF7IP2Q5U623 682 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 ERAP2Q6P179 960 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TRMT11Q7Z4G4 463 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 CDC26Q8NHZ8 85 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 ZSCAN18Q8TBC5 510 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 MCOLN3Q8TDD5 553 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 FBXO32Q969P5 355 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 BLZF1Q9H2G9 400 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 NAGPAQ9UK23 515 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 PPP1R9AQ9ULJ8 1098 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 USP18Q9UMW8 372 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 PCDH8O95206 1070 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 ATF2P15336 505 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 YWHABP31946 246 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 AARSP49588 968 aaKnown RBP eCLIP9.69□□□□□ -0.863e-6■■■■■ 61.8
VPS8-207ENST00000436792 FLT3LGP49771 235 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 PTH1RQ03431 593 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 TIGD5Q53EQ6 642 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 MFSD4BQ5TF39 518 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 C12orf60Q5U649 245 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 C8orf74Q6P047 294 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 B3GALNT2Q8NCR0 500 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 UBLCP1Q8WVY7 318 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 CCDC124Q96CT7 223 aaKnown RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 DYDC2Q96IM9 177 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 NUP85Q9BW27 656 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 KIAA1683Q9H0B3 1180 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
VPS8-207ENST00000436792 SAE1Q9UBE0 346 aaPredicted RBP9.69□□□□□ -0.86
VPS8-207ENST00000436792 H3BRB1 525 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 SLC16A4O15374 487 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 TCF7P36402 384 aaPredicted RBP9.68□□□□□ -0.86
VPS8-207ENST00000436792 ALX1Q15699 326 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 DENND2CQ68D51 928 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 TMTC3Q6ZXV5 915 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
VPS8-207ENST00000436792 ASAH2Q9NR71 780 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 HACD3Q9P035 362 aa9.68□□□□□ -0.86
VPS8-207ENST00000436792 HDAC6Q9UBN7 1215 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms