RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 LRRC23Q53EV4 343 aaPredicted RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 TRIM69Q86WT6 500 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 ABTB1Q969K4 478 aaPredicted RBP11.83□□□□□ -0.52
SCN4A-201ENST00000435607 FBXL5Q9UKA1 691 aa11.83□□□□□ -0.52
SCN4A-201ENST00000435607 DIAPH2O60879 1101 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CD4P01730 458 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CCNE1P24864 410 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 KRT20P35900 424 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ZNF445P59923 1031 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 PROM2Q8N271 834 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 MYCBPQ99417 103 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 POLE3Q9NRF9 147 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 DDHD2O94830 711 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 EIF2S1P05198 315 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 EPB42P16452 691 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CYP4A22Q5TCH4 519 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 TNIP2Q8NFZ5 429 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 DIS3LQ8TF46 1054 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 PRPF18Q99633 342 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 PITPNM3Q9BZ71 974 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 HACL1Q9UJ83 578 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 INTUQ9ULD6 942 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 H0YC42 278 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ZNF544Q6NX49 715 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CATSPER3Q86XQ3 398 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ARHGAP18Q8N392 663 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ASAP1Q9ULH1 1129 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 C3orf70A6NLC5 250 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 DPF3Q92784 378 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SLITRK1Q96PX8 696 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CAB39Q9Y376 341 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 WDR47O94967 919 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SLCO1A2P46721 670 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 MRPS15P82914 257 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 LLGL1Q15334 1064 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 VMP1Q96GC9 406 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CAND2O75155 1236 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ERVK-10P10266 1014 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ALDH7A1P49419 539 aaKnown RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SPP2Q13103 211 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SWSAP1Q6NVH7 229 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
SCN4A-201ENST00000435607 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 RAB23Q9ULC3 237 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
SCN4A-201ENST00000435607 ANGPT2O15123 496 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ACSL3O95573 720 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 P4HBP07237 508 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 HPGDP15428 266 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CACNB2Q08289 660 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ANGPT1Q15389 498 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 RCSD1Q6JBY9 416 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PASD1Q8IV76 773 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ABCC4O15439 1325 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 KIAA0391O15091 583 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PRMT3O60678 531 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 MMP1P03956 469 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PSMC5P62195 406 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 UGP2Q16851 508 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 PTRHD1Q6GMV3 140 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 LRRC8AQ8IWT6 810 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 TK2O00142 265 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 ATPAF2Q8N5M1 289 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 GID8Q9NWU2 228 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 IGSF3O75054 1194 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 TADA3O75528 432 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 LCP1P13796 627 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 CPT1AP50416 773 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 TWF1Q12792 350 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 INPP5AQ14642 412 aa11.81□□□□□ -0.52
SCN4A-201ENST00000435607 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
SCN4A-201ENST00000435607 SEPT5Q99719 369 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms