RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 PARVAQ9NVD7 372 aa16.63■□□□□ 0.25
NEDD4-202ENST00000435532 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 DRAP1Q14919 205 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 CHADLQ6NUI6 762 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 CD302Q8IX05 232 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 YME1L1Q96TA2 773 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 KIAA1683Q9H0B3 1180 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 ENTPD7Q9NQZ7 604 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 CLTAP09496 248 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 ACADSBP45954 432 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 HERVK_113P62684 666 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 E2F5Q15329 346 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 MGAT5BQ3V5L5 792 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 TAF1BQ53T94 588 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 HAUS8Q9BT25 410 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 SPATC1LQ9H0A9 340 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 VCX3BQ9H321 246 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 TRIM17Q9Y577 477 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 CCDC160A6NGH7 325 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 HMGB1P1B2RPK0 211 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 DSG3P32926 999 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 PSMD6Q15008 389 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 WDR35Q9P2L0 1181 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 ADAMTS1Q9UHI8 967 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 SULT1E1P49888 294 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 OAZ1P54368 228 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 MAD2L2Q9UI95 211 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 EIF3DO15371 548 aaKnown RBP eCLIP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 SPOPLQ6IQ16 392 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 HMX1Q9NP08 348 aaPredicted RBP16.62■□□□□ 0.25
NEDD4-202ENST00000435532 SPTLC3Q9NUV7 552 aa16.62■□□□□ 0.25
NEDD4-202ENST00000435532 U2AF2P26368 475 aaKnown RBP eCLIP16.61■□□□□ 0.25
NEDD4-202ENST00000435532 NLRP11P59045 1033 aaKnown RBP16.61■□□□□ 0.25
NEDD4-202ENST00000435532 IL9RQ01113 521 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 MUTP22033 750 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 PPP1R13BQ96KQ4 1090 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
NEDD4-202ENST00000435532 UBQLN1Q9UMX0 589 aaKnown RBP16.61■□□□□ 0.25
NEDD4-202ENST00000435532 PPME1Q9Y570 386 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 MFAP3LO75121 409 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 SHCBP1Q8NEM2 672 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 MT-ND3P03897 115 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 INPP5BP32019 993 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 NFIAQ12857 509 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 PPIL2Q13356 520 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 DAGLBQ8NCG7 672 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 ZNF564Q8TBZ8 553 aaPredicted RBP16.61■□□□□ 0.25
NEDD4-202ENST00000435532 FAM71BQ8TC56 605 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 ABCF3Q9NUQ8 709 aa16.61■□□□□ 0.25
NEDD4-202ENST00000435532 EXTL3O43909 919 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 EGFRP00533 1210 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 AKR1A1P14550 325 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
NEDD4-202ENST00000435532 NR1H3Q13133 447 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 DEFB115Q30KQ5 88 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 PLA2G4FQ68DD2 849 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 HEATR6Q6AI08 1181 aaKnown RBP16.6■□□□□ 0.25
NEDD4-202ENST00000435532 ZBTB9Q96C00 473 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 CABS1Q96KC9 395 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 C7orf25Q9BPX7 421 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 SIK2Q9H0K1 926 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 TUBE1Q9UJT0 475 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 PPP1R12AO14974 1030 aaPredicted RBP16.6■□□□□ 0.25
NEDD4-202ENST00000435532 TAF6P49848 677 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 DR1Q01658 176 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 CEP120Q8N960 986 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 NCOA4Q13772 614 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 GTF2H3Q13889 308 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 BBS9Q3SYG4 887 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 TSSK1BQ9BXA7 367 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 SLC4A7Q9Y6M7 1214 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 IQANK1A0A1B0GTG1 560 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 FGFR2P21802 821 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 MOXD1Q6UVY6 613 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 PCDHB12Q9Y5F1 795 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 MNAT1P51948 309 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 SLITRK1Q96PX8 696 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 DHX35Q9H5Z1 703 aaKnown RBP16.6■□□□□ 0.25
NEDD4-202ENST00000435532 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
NEDD4-202ENST00000435532 CARNS1A5YM72 827 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 WNT10BO00744 389 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 PGK2P07205 417 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEDD4-202ENST00000435532 PLTPP55058 493 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 IRX4P78413 519 aa16.59■□□□□ 0.25
NEDD4-202ENST00000435532 TMEM132BQ14DG7 1078 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms