RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 GAP43P17677 238 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 ABCD1P33897 745 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 STRN3Q13033 797 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 CSPP1Q1MSJ5 1256 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 ZPBP2Q6X784 338 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 SFR1Q86XK3 245 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 FAM178BQ8IXR5 827 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 HACE1Q8IYU2 909 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 AAASQ9NRG9 546 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 KANSL3Q9P2N6 904 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 PLAGL2Q9UPG8 496 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 PCDHB12Q9Y5F1 795 aa20.17■□□□□ 0.82
HLA-F-220ENST00000434407 SPTBN5Q9NRC6 3674 aaKnown RBP20.16■□□□□ 0.82
HLA-F-220ENST00000434407 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 ARL5CA6NH57 179 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 K7ENM7 598 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 PPP1R37O75864 691 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 PIGRP01833 764 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 ITGB1P05556 798 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 PFKFB1P16118 471 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 IGFBP4P22692 258 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 NMT1P30419 496 aaKnown RBP20.16■□□□□ 0.82
HLA-F-220ENST00000434407 AMPD3Q01432 767 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 TMEM132AQ24JP5 1023 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 ZNF720Q7Z2F6 126 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 KLHL23Q8NBE8 558 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 GSTCDQ8NEC7 633 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 MAFAQ8NHW3 353 aaPredicted RBP20.16■□□□□ 0.82
HLA-F-220ENST00000434407 SPPL3Q8TCT6 385 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 STAMQ92783 540 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 C7orf25Q9BPX7 421 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 LMAN2LQ9H0V9 348 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 ZHX3Q9H4I2 956 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 OLFML3Q9NRN5 406 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 TBX20Q9UMR3 447 aa20.16■□□□□ 0.82
HLA-F-220ENST00000434407 CARNS1A5YM72 827 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 GRM6O15303 877 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 ACTN4O43707 911 aaKnown RBP20.15■□□□□ 0.82
HLA-F-220ENST00000434407 GTPBP6O43824 516 aaPredicted RBP20.15■□□□□ 0.82
HLA-F-220ENST00000434407 TOM1L1O75674 476 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 SLFN14P0C7P3 912 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 AKAP5P24588 427 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 SPOUT1Q5T280 376 aaKnown RBP20.15■□□□□ 0.82
HLA-F-220ENST00000434407 KCNT2Q6UVM3 1135 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 MPZL3Q6UWV2 235 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 APBB1IPQ7Z5R6 666 aaPredicted RBP20.15■□□□□ 0.82
HLA-F-220ENST00000434407 URGCPQ8TCY9 931 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 MRPL38Q96DV4 380 aaKnown RBP20.15■□□□□ 0.82
HLA-F-220ENST00000434407 GAD1Q99259 594 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 CDT1Q9H211 546 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 NRDE2Q9H7Z3 1164 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 MIOSQ9NXC5 875 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 USP25Q9UHP3 1055 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 INPP5FQ9Y2H2 1132 aa20.15■□□□□ 0.82
HLA-F-220ENST00000434407 B4GALT3O60512 393 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 MCF2P10911 925 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 MLH1P40692 756 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 CAMK1Q14012 370 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 ZNF280BQ86YH2 543 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 MAP4K3Q8IVH8 894 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 HVCN1Q96D96 273 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
HLA-F-220ENST00000434407 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 ZNF558Q96NG5 402 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 APOL6Q9BWW8 343 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 PANK4Q9NVE7 773 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 SNTG2Q9NY99 539 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 SERTAD1Q9UHV2 236 aa20.14■□□□□ 0.81
HLA-F-220ENST00000434407 RECQL4O94761 1208 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 DDHD2O94830 711 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 IDEP14735 1019 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 PPM1AP35813 382 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 GRM5P41594 1212 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 NDUFA8P51970 172 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 BCAR1P56945 870 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 PLCB3Q01970 1234 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 UBE3AQ05086 875 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 MCL1Q07820 350 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 DSC1Q08554 894 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 PTPROQ16827 1216 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 ZNF568Q3ZCX4 644 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 HERC4Q5GLZ8 1057 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-220ENST00000434407 CCDC65Q8IXS2 484 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 SLC39A11Q8N1S5 342 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 ALG13Q9NP73 1137 aaKnown RBP20.13■□□□□ 0.81
HLA-F-220ENST00000434407 CHMP5Q9NZZ3 219 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 PARP2Q9UGN5 583 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 LZTS1Q9Y250 596 aa20.13■□□□□ 0.81
HLA-F-220ENST00000434407 PDCD11Q14690 1871 aaKnown RBP20.13■□□□□ 0.81
HLA-F-220ENST00000434407 FGF18O76093 207 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 POMCP01189 267 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 GALTP07902 379 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 DNAJB1P25685 340 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 PBX3P40426 434 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 SYKP43405 635 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 SCNN1GP51170 649 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 RNASELQ05823 741 aaKnown RBP20.12■□□□□ 0.81
HLA-F-220ENST00000434407 EHHADHQ08426 723 aa20.12■□□□□ 0.81
HLA-F-220ENST00000434407 COASYQ13057 564 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms