RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 ACTN3Q08043 901 aaPredicted RBP14.69□□□□□ -0.06
COL6A3-207ENST00000433762 TNFAIP8L3Q5GJ75 292 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 KRT39Q6A163 491 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 SMYD5Q6GMV2 418 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 MAP4K3Q8IVH8 894 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 SPIRE2Q8WWL2 714 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 CLEC4DQ8WXI8 215 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 KIFAP3Q92845 792 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 KCNN1Q92952 543 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 FBXL18Q96ME1 805 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 CBWD1Q9BRT8 395 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 CENPHQ9H3R5 247 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 LRRC19Q9H756 370 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 PASKQ96RG2 1323 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 RARGP13631 454 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 SCP2P22307 547 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 PSMC5P62195 406 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 KRT76Q01546 638 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 CDR2Q01850 454 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 PTPROQ16827 1216 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 LACTB2Q53H82 288 aaPredicted RBP14.69□□□□□ -0.06
COL6A3-207ENST00000433762 MFSD5Q6N075 450 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 SLC13A5Q86YT5 568 aaPredicted RBP14.69□□□□□ -0.06
COL6A3-207ENST00000433762 RAPGEF5Q92565 580 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 DHX38Q92620 1227 aaKnown RBP14.69□□□□□ -0.06
COL6A3-207ENST00000433762 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
COL6A3-207ENST00000433762 TRPC6Q9Y210 931 aa14.69□□□□□ -0.06
COL6A3-207ENST00000433762 TCP10L2B9ZVM9 353 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 GHRP10912 638 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 COMTP21964 271 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 YWHABP31946 246 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 GCLMP48507 274 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 SMTNP53814 917 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 UBXN2AP68543 259 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 TRMT10CQ7L0Y3 403 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CACNA2D3Q8IZS8 1091 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 ZNF564Q8TBZ8 553 aaPredicted RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 KAT2BQ92831 832 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 ART4Q93070 314 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CABS1Q96KC9 395 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 SENP7Q9BQF6 1050 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 NTPCRQ9BSD7 190 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 MAF1Q9H063 256 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 PPANQ9NQ55 473 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 DKC1O60832 514 aaKnown RBP eCLIP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 COILP38432 576 aaPredicted RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 RWDD2BP57060 319 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 RTP1P59025 263 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 FMO1Q01740 532 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 SKIDA1Q1XH10 827 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 GKAP1Q5VSY0 366 aaPredicted RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CCDC137Q6PK04 289 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 SLC30A10Q6XR72 485 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 NOP9Q86U38 636 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 ZNF677Q86XU0 584 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 FBXO25Q8TCJ0 367 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 TRIM11Q96F44 468 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 MFSD14AQ96MC6 490 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 XPO6Q96QU8 1125 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 AVENQ9NQS1 362 aaPredicted RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 WHRNQ9P202 907 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 KCNG1Q9UIX4 513 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 CAPN7Q9Y6W3 813 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 ASTN2O75129 1339 aaPredicted RBP14.68□□□□□ -0.06
COL6A3-207ENST00000433762 PARP14Q460N5 1801 aa14.68□□□□□ -0.06
COL6A3-207ENST00000433762 GOLGA6L7A0A1B0GV03 622 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 WDR64B1ANS9 1081 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 MYBL1P10243 752 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PDE6CP51160 858 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 GCNT1Q02742 428 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 MTMR1Q13613 665 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 RDH13Q8NBN7 331 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PLEKHO2Q8TD55 490 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 KRT35Q92764 455 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 GLG1Q92896 1179 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 CHMP6Q96FZ7 201 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 KREMEN1Q96MU8 473 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 NT5C1BQ96P26 610 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 RABEP2Q9H5N1 569 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 A1CFQ9NQ94 594 aaKnown RBP14.67□□□□□ -0.06
COL6A3-207ENST00000433762 TMOD4Q9NZQ9 345 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 BCCIPQ9P287 314 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PGAP2Q9UHJ9 254 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 FSCN2O14926 492 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 ASAP2O43150 1006 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 RPL21P46778 160 aaKnown RBP14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PLTPP55058 493 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 CAV1Q03135 178 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PTP4A2Q12974 167 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 ZNF211Q13398 564 aaPredicted RBP14.67□□□□□ -0.06
COL6A3-207ENST00000433762 SNRNP35Q16560 246 aaKnown RBP14.67□□□□□ -0.06
COL6A3-207ENST00000433762 ZNF568Q3ZCX4 644 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 PPP1R2P3Q6NXS1 205 aa14.67□□□□□ -0.06
COL6A3-207ENST00000433762 AGBL3Q8NEM8 1001 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms