RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 AAASQ9NRG9 546 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 EXOC7Q9UPT5 735 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 COL4A6Q14031 1691 aa17.01■□□□□ 0.31
TREX1-201ENST00000433541 CLDN3O15551 220 aa17■□□□□ 0.31
TREX1-201ENST00000433541 TOM1L1O75674 476 aa17■□□□□ 0.31
TREX1-201ENST00000433541 IGFBP4P22692 258 aa17■□□□□ 0.31
TREX1-201ENST00000433541 MLH1P40692 756 aa17■□□□□ 0.31
TREX1-201ENST00000433541 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
TREX1-201ENST00000433541 ALCAMQ13740 583 aa17■□□□□ 0.31
TREX1-201ENST00000433541 GRIN2CQ14957 1233 aa17■□□□□ 0.31
TREX1-201ENST00000433541 NOLC1Q14978 699 aaKnown RBP eCLIP17■□□□□ 0.31
TREX1-201ENST00000433541 KANK3Q6NY19 840 aa17■□□□□ 0.31
TREX1-201ENST00000433541 UNC13DQ70J99 1090 aa17■□□□□ 0.31
TREX1-201ENST00000433541 ZNF720Q7Z2F6 126 aa17■□□□□ 0.31
TREX1-201ENST00000433541 SPRED2Q7Z698 418 aa17■□□□□ 0.31
TREX1-201ENST00000433541 MRPL10Q7Z7H8 261 aaKnown RBP17■□□□□ 0.31
TREX1-201ENST00000433541 THNSL1Q8IYQ7 743 aa17■□□□□ 0.31
TREX1-201ENST00000433541 GDPD5Q8WTR4 605 aa17■□□□□ 0.31
TREX1-201ENST00000433541 CASD1Q96PB1 797 aa17■□□□□ 0.31
TREX1-201ENST00000433541 GBP4Q96PP9 640 aa17■□□□□ 0.31
TREX1-201ENST00000433541 ACCSQ96QU6 501 aa17■□□□□ 0.31
TREX1-201ENST00000433541 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
TREX1-201ENST00000433541 RC3H2Q9HBD1 1191 aaKnown RBP17■□□□□ 0.31
TREX1-201ENST00000433541 OLFML3Q9NRN5 406 aa17■□□□□ 0.31
TREX1-201ENST00000433541 TYW1Q9NV66 732 aaKnown RBP17■□□□□ 0.31
TREX1-201ENST00000433541 KLK14Q9P0G3 267 aa17■□□□□ 0.31
TREX1-201ENST00000433541 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
TREX1-201ENST00000433541 PCDHB12Q9Y5F1 795 aa17■□□□□ 0.31
TREX1-201ENST00000433541 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
TREX1-201ENST00000433541 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
TREX1-201ENST00000433541 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
TREX1-201ENST00000433541 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
TREX1-201ENST00000433541 CSPG5O95196 566 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 POMCP01189 267 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 MYBP10242 640 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 LAG3P18627 525 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 ERVK-21P61565 698 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 GTF2BQ00403 316 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 EPC2Q52LR7 807 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 FAM26FQ5R3K3 315 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 NOC3LQ8WTT2 800 aaKnown RBP16.99■□□□□ 0.31
TREX1-201ENST00000433541 MYLIPQ8WY64 445 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 RSPH1Q8WYR4 309 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 GAD1Q99259 594 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 CDT1Q9H211 546 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 RNF19AQ9NV58 838 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 SNTG2Q9NY99 539 aa16.99■□□□□ 0.31
TREX1-201ENST00000433541 CHD9Q3L8U1 2897 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 PVALEFA0A1B0GWK0 134 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 FRMD3A2A2Y4 597 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 ARL5CA6NH57 179 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 RFXAPO00287 272 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 GADD45BO75293 160 aaPredicted RBP16.98■□□□□ 0.31
TREX1-201ENST00000433541 OFD1O75665 1012 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 RECQL4O94761 1208 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 MYL1P05976 194 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 MCF2P10911 925 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 FOSL2P15408 326 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
TREX1-201ENST00000433541 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 ZBTB45Q96K62 511 aaPredicted RBP16.98■□□□□ 0.31
TREX1-201ENST00000433541 ZFP42Q96MM3 310 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 FIZ1Q96SL8 496 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
TREX1-201ENST00000433541 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 SLC39A2Q9NP94 309 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
TREX1-201ENST00000433541 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 HCSTQ9UBK5 93 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 GIT1Q9Y2X7 761 aa16.98■□□□□ 0.31
TREX1-201ENST00000433541 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 GOLGA6L22H0YM25 854 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 PRPF6O94906 941 aaKnown RBP16.97■□□□□ 0.31
TREX1-201ENST00000433541 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 BMPR1AP36894 532 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 ALDH7A1P49419 539 aaKnown RBP16.97■□□□□ 0.31
TREX1-201ENST00000433541 SCNN1GP51170 649 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 CASP5P51878 434 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 UBE2HP62256 183 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 GPM6BQ13491 265 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 POSTNQ15063 836 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 CNNM4Q6P4Q7 775 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
TREX1-201ENST00000433541 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 POMGNT1Q8WZA1 660 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 CDX2Q99626 313 aaPredicted RBP16.97■□□□□ 0.31
TREX1-201ENST00000433541 MSTO1Q9BUK6 570 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 TBC1D13Q9NVG8 400 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 MTMR10Q9NXD2 777 aa16.97■□□□□ 0.31
TREX1-201ENST00000433541 NR1I2O75469 434 aa16.96■□□□□ 0.31
TREX1-201ENST00000433541 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms