RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 L1RE1Q9UN81 338 aa7.4□□□□□ -1.22
USP54-206ENST00000433394 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 DDX3XO00571 662 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP54-206ENST00000433394 ZNF28P17035 718 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 RPL17P18621 184 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 MRE11P49959 708 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 AGFG1P52594 562 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 NOGQ13253 232 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 POLD3Q15054 466 aaPredicted RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 CNN3Q15417 329 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 TRIM68Q6AZZ1 485 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 Q6ZUG5 572 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 MORC1Q86VD1 984 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 KIAA0319LQ8IZA0 1049 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 NSUN6Q8TEA1 469 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 FNIP1Q8TF40 1166 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 ZCCHC14Q8WYQ9 949 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 PPP1R16BQ96T49 567 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 OR10A2Q9H208 303 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 CNOT6Q9ULM6 557 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 TPCN1Q9ULQ1 816 aa7.39□□□□□ -1.23
USP54-206ENST00000433394 RBM8AQ9Y5S9 174 aaKnown RBP7.39□□□□□ -1.23
USP54-206ENST00000433394 CARMIL2Q6F5E8 1435 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 A0A1W2PPL8 197 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
USP54-206ENST00000433394 KLHL18O94889 574 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 JUNP05412 331 aaKnown RBP7.38□□□□□ -1.23
USP54-206ENST00000433394 MYL3P08590 195 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 FTH1P19P0C7X4 201 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 KIR2DL3P43628 341 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 FXR1P51114 621 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP54-206ENST00000433394 HK3P52790 923 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 RRADP55042 308 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 ADAM15Q13444 863 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 SEMA5AQ13591 1074 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 RTP5Q14D33 572 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 PCOLCEQ15113 449 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 LONRF1Q17RB8 773 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 ABHD15Q6UXT9 468 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 CLEC14AQ86T13 490 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 FAM124AQ86V42 546 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 BCL6BQ8N143 479 aaPredicted RBP7.38□□□□□ -1.23
USP54-206ENST00000433394 KLHL36Q8N4N3 616 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 ENAHQ8N8S7 591 aaPredicted RBP7.38□□□□□ -1.23
USP54-206ENST00000433394 PIK3C3Q8NEB9 887 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 GJA10Q969M2 543 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 SLC38A3Q99624 504 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 WDCPQ9H6R7 721 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 GCM1Q9NP62 436 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 KLHL11Q9NVR0 708 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 SPATA6Q9NWH7 488 aaPredicted RBP7.38□□□□□ -1.23
USP54-206ENST00000433394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.38□□□□□ -1.233e-8■■■□□ 17.9
USP54-206ENST00000433394 MOCS1Q9NZB8 636 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 PCDHB1Q9Y5F3 818 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 PCDHGB6Q9Y5F9 930 aa7.38□□□□□ -1.23
USP54-206ENST00000433394 MYBBP1AQ9BQG0 1328 aaKnown RBP7.37□□□□□ -1.23
USP54-206ENST00000433394 A0A088AWK7 358 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 A6NNZ2 444 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 PHGDHO43175 533 aaKnown RBP7.37□□□□□ -1.23
USP54-206ENST00000433394 GPR32O75388 356 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 COL6A1P12109 1028 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 IL2RBP14784 551 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SYN1P17600 705 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 GLDCP23378 1020 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 PTPN7P35236 360 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 HTR3AP46098 478 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SARSP49591 514 aaKnown RBP7.37□□□□□ -1.23
USP54-206ENST00000433394 ZNF280AP59817 542 aaPredicted RBP7.37□□□□□ -1.23
USP54-206ENST00000433394 RAB1AP62820 205 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 DSC2Q02487 901 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 CREMQ03060 361 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 BTKQ06187 659 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 GALEQ14376 348 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SEPT2Q15019 361 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 ZNF385BQ569K4 471 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 CYB5RLQ6IPT4 315 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 HEATR3Q7Z4Q2 680 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SRLQ86TD4 932 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 OR2I1PQ8NGU4 316 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 BRIX1Q8TDN6 353 aaKnown RBP7.37□□□□□ -1.23
USP54-206ENST00000433394 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SLC35A4Q96G79 324 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SELENOOQ9BVL4 669 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 ARMT1Q9H993 441 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 JADE2Q9NQC1 790 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 PNPOQ9NVS9 261 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 RTEL1Q9NZ71 1219 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 GPRC5DQ9NZD1 345 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 ZDHHC9Q9Y397 364 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 SNX13Q9Y5W8 968 aa7.37□□□□□ -1.23
USP54-206ENST00000433394 ETV2O00321 342 aaPredicted RBP7.36□□□□□ -1.23
USP54-206ENST00000433394 MTSS1O43312 755 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 BPIFB4P59827 614 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 KHDC1Q4VXA5 237 aaKnown RBP7.36□□□□□ -1.23
USP54-206ENST00000433394 PRR31Q5SQ13 230 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 AGBL4Q5VU57 503 aa7.36□□□□□ -1.23
USP54-206ENST00000433394 TSHZ1Q6ZSZ6 1077 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms