RNA–Protein interactions for RNA: ENST00000433369.6

PTPN12-205, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-205	ENST00000433369	PARP2	Q9UGN5	583 aa		13.95	□□□□□ -0.18
PTPN12-205	ENST00000433369	CDH22	Q9UJ99	828 aa		13.95	□□□□□ -0.18
PTPN12-205	ENST00000433369	GIT1	Q9Y2X7	761 aa		13.95	□□□□□ -0.18
PTPN12-205	ENST00000433369	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN12-205	ENST00000433369	CIT	O14578	2027 aa		13.95	□□□□□ -0.18
PTPN12-205	ENST00000433369	CCDC169	A6NNP5	214 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	N4BP3	O15049	544 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	CLASP2	O75122	1294 aa	Known RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	CXCL14	O95715	111 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	PDC	P20941	246 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	GUCY2C	P25092	1073 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	MARCKS	P29966	332 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	PLXNA3	P51805	1871 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	COASY	Q13057	564 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	SMAD4	Q13485	552 aa	Known RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	SMC1A	Q14683	1233 aa	Known RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	KARS	Q15046	597 aa	Known RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	SMAD2	Q15796	467 aa	Known RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	SMRP1	Q8NCR6	262 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	SNX21	Q969T3	373 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	FAM193B	Q96PV7	902 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	TMEM175	Q9BSA9	504 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	APOL5	Q9BWW9	433 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	UBN1	Q9NPG3	1134 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	ARHGAP28	Q9P2N2	729 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	KANSL3	Q9P2N6	904 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	FAN1	Q9Y2M0	1017 aa		13.94	□□□□□ -0.18
PTPN12-205	ENST00000433369	PTGES	O14684	152 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	SLC16A4	O15374	487 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	RECQL4	O94761	1208 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	EFEMP2	O95967	443 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	ALDH2	P05091	517 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CTSA	P10619	480 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	PLCG1	P19174	1290 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	IGFBP6	P24592	240 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CA8	P35219	290 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	OR1G1	P47890	313 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CEBPZ	Q03701	1054 aa	Known RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	ZP2	Q05996	745 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	DHX8	Q14562	1220 aa	Known RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	TMEM132A	Q24JP5	1023 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	PUS10	Q3MIT2	529 aa	Known RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	ATF7IP2	Q5U623	682 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	SYCE2	Q6PIF2	218 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CEP120	Q8N960	986 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	EPSTI1	Q96J88	318 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	AK8	Q96MA6	479 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CLIC6	Q96NY7	704 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	CDCA3	Q99618	268 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	PAAF1	Q9BRP4	392 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	NT5C3A	Q9H0P0	336 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	EPHX3	Q9H6B9	360 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	FBXO2	Q9UK22	296 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	HCFC2	Q9Y5Z7	792 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	VWA8	A3KMH1	1905 aa		13.93	□□□□□ -0.18
PTPN12-205	ENST00000433369	TRIO	O75962	3097 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369		K7ERI5	159 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	ABLIM1	O14639	778 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	STX6	O43752	255 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	BMP15	O95972	392 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	LONP1	P36776	959 aa	Known RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	UBA7	P41226	1012 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	EFNA5	P52803	228 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	DMP1	Q13316	513 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	MCM6	Q14566	821 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	PTPN14	Q15678	1187 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	NAB2	Q15742	525 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	ANKRD54	Q6NXT1	300 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	KANK3	Q6NY19	840 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	TMEM184A	Q6ZMB5	413 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	RNF168	Q8IYW5	571 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	GJD3	Q8N144	294 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	CDK5RAP3	Q96JB5	506 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	ZBTB45	Q96K62	511 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	DRC1	Q96MC2	740 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	USP28	Q96RU2	1077 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	ACO2	Q99798	780 aa	Known RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	TARS2	Q9BW92	718 aa	Known RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	S1PR5	Q9H228	398 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	TMEM134	Q9H6X4	195 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	PTPRH	Q9HD43	1115 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	KMT5A	Q9NQR1	393 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	GDA	Q9Y2T3	454 aa		13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	USP15	Q9Y4E8	981 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN12-205	ENST00000433369	PHLPP2	Q6ZVD8	1323 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	PDCD11	Q14690	1871 aa	Known RBP	13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	C2orf16	Q68DN1	1984 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	C19orf67	A6NJJ6	358 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	LILRB3	O75022	631 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	PLS3	P13797	630 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	EPCAM	P16422	314 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	GRIK3	Q13003	919 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	GPBP1	Q86WP2	473 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	ADHFE1	Q8IWW8	467 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	HACE1	Q8IYU2	909 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	TMEM161B	Q8NDZ6	487 aa		13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN12-205	ENST00000433369	SUSD6	Q92537	303 aa		13.91	□□□□□ -0.18

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