RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.45
SMPD4-205ENST00000431183 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
SMPD4-205ENST00000431183 CCDC102AQ96A19 550 aa12.21□□□□□ -0.45
SMPD4-205ENST00000431183 GDAP1L1Q96MZ0 367 aa12.21□□□□□ -0.45
SMPD4-205ENST00000431183 MAFBQ9Y5Q3 323 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-205ENST00000431183 A0A087X0T9 212 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 LRRC10BA6NIK2 292 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 KIF3CO14782 793 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 FAM228BP0C875 321 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.46
SMPD4-205ENST00000431183 RGS2P41220 211 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 STAT1P42224 750 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 PTK2Q05397 1052 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 PAN2Q504Q3 1202 aaKnown RBP12.21□□□□□ -0.46
SMPD4-205ENST00000431183 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.46
SMPD4-205ENST00000431183 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-205ENST00000431183 PHIPQ8WWQ0 1821 aa12.21□□□□□ -0.46
SMPD4-205ENST00000431183 GREB1LQ9C091 1923 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-205ENST00000431183 FRMD3A2A2Y4 597 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 RHOXF2BP0C7M4 288 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SLC39A4Q6P5W5 647 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SLC20A1Q8WUM9 679 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 RHOXF2Q9BQY4 288 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 RNF186Q9NXI6 227 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 EHD2Q9NZN4 543 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 INPP5FQ9Y2H2 1132 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SIK3Q9Y2K2 1263 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 STAM2O75886 525 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 EPM2AIP1Q7L775 607 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-205ENST00000431183 TMEM139Q8IV31 216 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SECISBP2LQ93073 1101 aaKnown RBP12.2□□□□□ -0.46
SMPD4-205ENST00000431183 NUP58Q9BVL2 599 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 HBP1O60381 514 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 ZMYND10O75800 440 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 ETF1P62495 437 aaKnown RBP12.2□□□□□ -0.46
SMPD4-205ENST00000431183 ERCC6LQ2NKX8 1250 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 WDR44Q5JSH3 913 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 FRMD5Q7Z6J6 570 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 PANX2Q96RD6 677 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
SMPD4-205ENST00000431183 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 EVI5O60447 810 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 SLU7O95391 586 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 MAPTP10636 758 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 PBX1P40424 430 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 KLHDC7AQ5VTJ3 777 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 NAA35Q5VZE5 725 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TWF2Q6IBS0 349 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 PHLDB3Q6NSJ2 640 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TMEM270Q6UE05 265 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TAS1R3Q7RTX0 852 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 REXO1L1PQ8IX06 675 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 SPC25Q9HBM1 224 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 ZNF185O15231 689 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 EDNRBP24530 442 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 FCGRTP55899 365 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 SP3Q02447 781 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 ATF7IP2Q5U623 682 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TRIB2Q92519 343 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 ERO1AQ96HE7 468 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 MYH11P35749 1972 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 NFASCO94856 1347 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 LRRIQ3A6PVS8 624 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMPD4-205ENST00000431183 NOL4O94818 638 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 TOMM70O94826 608 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 MMP3P08254 477 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 IQCF3P0C7M6 154 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 CAP1Q01518 475 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 FAM167AQ96KS9 214 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 PSME4Q14997 1843 aa12.19□□□□□ -0.46
SMPD4-205ENST00000431183 RARBP10826 455 aa12.18□□□□□ -0.46
SMPD4-205ENST00000431183 ZNF131P52739 623 aa12.18□□□□□ -0.46
SMPD4-205ENST00000431183 CDH8P55286 799 aa12.18□□□□□ -0.46
SMPD4-205ENST00000431183 TRIM14Q14142 442 aa12.18□□□□□ -0.46
SMPD4-205ENST00000431183 GRB14Q14449 540 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms