RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RHOBTB1O94844 696 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 BMP10O95393 424 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ATP4AP20648 1035 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 FANCCQ00597 558 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 FUT2Q10981 343 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CYLC2Q14093 348 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DSC3Q14574 896 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GRIK4Q16099 956 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 FAM26DQ5JW98 314 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PPP1R26Q5T8A7 1209 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF425Q6IV72 752 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZYG11AQ6WRX3 759 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ANKS3Q6ZW76 656 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SCUBE1Q8IWY4 988 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SCYL3Q8IZE3 742 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZC3H10Q96K80 434 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NSMCE3Q96MG7 304 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 RBM42Q9BTD8 480 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF408Q9H9D4 720 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SEMA3GQ9NS98 782 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 EVA1BQ9NVM1 165 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DDX20Q9UHI6 824 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NOVA2Q9UNW9 492 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CLEC11AQ9Y240 323 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PLAAQ9Y263 795 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DNALI1O14645 258 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DNAJB5O75953 348 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 LMNAP02545 664 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ATP2B4P23634 1241 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CAPZA2P47755 286 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 STAT2P52630 851 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GPR85P60893 370 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 RCN2Q14257 317 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GRM3Q14832 879 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 BEND6Q5SZJ8 279 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 BZW1Q7L1Q6 419 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DHX32Q7L7V1 743 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NUP54Q7Z3B4 507 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MAP4K3Q8IVH8 894 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZSCAN29Q8IWY8 852 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CSGALNACT2Q8N6G5 542 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NATD1Q8N6N6 113 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NKX2-3Q8TAU0 364 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 BCAS4Q8TDM0 211 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ASB2Q96Q27 587 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MLPHQ9BV36 600 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 BTBD2Q9BX70 525 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PUS3Q9BZE2 481 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 TRPC7Q9HCX4 862 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 WASH6PQ9NQA3 447 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PCDH10Q9P2E7 1040 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 LRFN2Q9ULH4 789 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NSFL1CQ9UNZ2 370 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GNEQ9Y223 722 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 A8MV72 311 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 WASLO00401 505 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 TRDMT1O14717 391 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PIAS2O75928 621 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 EIF4A1P60842 406 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 B2MP61769 119 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ARHGAP4P98171 946 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SCRN3Q0VDG4 424 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 STRIP1Q5VSL9 837 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 TLK2Q86UE8 772 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NLRP10Q86W26 655 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GRIN3AQ8TCU5 1115 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 NT5C3AQ9H0P0 336 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 RAD21L1Q9H4I0 556 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 STN1Q9H668 368 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 C8orf33Q9H7E9 229 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 LGR6Q9HBX8 967 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SDHAF3Q9NRP4 125 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 STK32BQ9NY57 414 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 WDR35Q9P2L0 1181 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 OR6C74A6NCV1 312 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MICAL2O94851 1124 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 SCAF4O95104 1147 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 KRT19P08727 400 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CCDC166P0CW27 439 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CDK4P11802 303 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 HPGDP15428 266 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CTHP32929 405 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ATXN1P54253 815 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 HABP2Q14520 560 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MOGQ16653 247 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 C1orf185Q5T7R7 199 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PRPF38BQ5VTL8 546 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PLEKHM3Q6ZWE6 761 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 RFPL4BQ6ZWI9 263 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GPR156Q8NFN8 814 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 DQX1Q8TE96 717 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 RAPGEF4Q8WZA2 1011 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 AHCYL2Q96HN2 611 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 VCPIP1Q96JH7 1222 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms