RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 LARP4BQ92615 738 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 RAD54LQ92698 747 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 ZFP42Q96MM3 310 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 ZNF396Q96N95 335 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 UHRF1Q96T88 793 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 MRPL4Q9BYD3 311 aaKnown RBP10.8□□□□□ -0.68
HDAC6-207ENST00000430858 BLOC1S4Q9NUP1 217 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 FAM50BQ9Y247 325 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 TNFSF13BQ9Y275 285 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 PCDHGC5Q9Y5F6 944 aa10.8□□□□□ -0.68
HDAC6-207ENST00000430858 TRANK1O15050 2925 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 H0YCG3 227 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 NRP1O14786 923 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 PER2O15055 1255 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 SLC16A4O15374 487 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 B4GALT3O60512 393 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 EDN1P05305 212 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 ZSCAN22P10073 491 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-207ENST00000430858 SCP2P22307 547 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 DDIT3P35638 169 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 NDUFV1P49821 464 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 GRIK3Q13003 919 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 STRN3Q13033 797 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 MCM6Q14566 821 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 NT5DC1Q5TFE4 455 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 EEF1DP3Q658K8 133 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 PTCRAQ6ISU1 281 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-207ENST00000430858 USP49Q70CQ1 688 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 GPBP1Q86WP2 473 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 VPS52Q8N1B4 723 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
HDAC6-207ENST00000430858 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 GSTCDQ8NEC7 633 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 KCNN1Q92952 543 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 CLIC6Q96NY7 704 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 ACO2Q99798 780 aaKnown RBP10.79□□□□□ -0.68
HDAC6-207ENST00000430858 ZBP1Q9H171 429 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 MIOSQ9NXC5 875 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 SNTG2Q9NY99 539 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 STK17AQ9UEE5 414 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 USP20Q9Y2K6 914 aa10.79□□□□□ -0.68
HDAC6-207ENST00000430858 NPHP3-ACAD11A0A0J9YXS1 232 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 C2orf71A6NGG8 1288 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 SPTLC2O15270 562 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 LINC01565O15544 149 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 PPP6R2O75170 966 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 TBX10O75333 385 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 RECQL4O94761 1208 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 FAM13AO94988 1023 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 YEATS4O95619 227 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 CXCL14O95715 111 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 F13A1P00488 732 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 KRT18P05783 430 aaKnown RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 SRGAP2BP0DMP2 458 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 CTSAP10619 480 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 MAPTP10636 758 aaKnown RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 OR1G1P47890 313 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 ZNF131P52739 623 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 NCKAP1LP55160 1127 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 DLX2Q07687 328 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 STK38Q15208 465 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 ZNF568Q3ZCX4 644 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 TMEM161BQ8NDZ6 487 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 REEP2Q9BRK0 252 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
HDAC6-207ENST00000430858 COLEC11Q9BWP8 271 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 PARVGQ9HBI0 331 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 PTPRHQ9HD43 1115 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 KLK14Q9P0G3 267 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 IRAK3Q9Y616 596 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 MYO7AQ13402 2215 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
HDAC6-207ENST00000430858 VCANP13611 3396 aa10.77□□□□□ -0.68
HDAC6-207ENST00000430858 XIRP2A4UGR9 3374 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TNFRSF10AO00220 468 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 TBCAO75347 108 aaKnown RBP10.77□□□□□ -0.69
HDAC6-207ENST00000430858 BRD1O95696 1058 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 GLP2RO95838 553 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 THP07101 528 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 MCF2P10911 925 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 IL9P15248 144 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 PROZP22891 400 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 ABCD1P33897 745 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 CA8P35219 290 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 GRM5P41594 1212 aa10.77□□□□□ -0.69
HDAC6-207ENST00000430858 COASYQ13057 564 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms