RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SMG7Q92540 1137 aaKnown RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 EMILIN2Q9BXX0 1053 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 AZI2Q9H6S1 392 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 JPH1Q9HDC5 661 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
ATG4B-211ENST00000429899 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
ATG4B-211ENST00000429899 NUP205Q92621 2012 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 KIF26AQ9ULI4 1882 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-211ENST00000429899 PNMA6FA0A0J9YX94 578 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 M0R2N6 131 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 ADAMTS3O15072 1205 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 NCAM2O15394 837 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 SPATA31D3P0C874 917 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 XBP1P17861 261 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 SRSF5Q13243 272 aaKnown RBP11.28□□□□□ -0.6
ATG4B-211ENST00000429899 MTMR1Q13613 665 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 CCDC6Q16204 474 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 LONRF3Q496Y0 759 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 SPATA31D4Q6ZUB0 917 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 BRAPQ7Z569 592 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 CCDC148Q8NFR7 591 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 GATA6Q92908 595 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 CDHR1Q96JP9 859 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
ATG4B-211ENST00000429899 RHOBTB2Q9BYZ6 727 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 FOXP1Q9H334 677 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-211ENST00000429899 PIDD1Q9HB75 910 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.65e-18■■■□□ 18
ATG4B-211ENST00000429899 SLC9A2Q9UBY0 812 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 ATG2BQ96BY7 2078 aa11.28□□□□□ -0.6
ATG4B-211ENST00000429899 SHISA7A6NL88 538 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 BTBD18B2RXH4 712 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 C2CD2LO14523 706 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 GIPC1O14908 333 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 ZSCAN20P17040 1043 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-211ENST00000429899 FGFR4P22455 802 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 KRT2P35908 639 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 SLC11A1P49279 550 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 ACTR2P61160 394 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
ATG4B-211ENST00000429899 FAM173BQ6P4H8 233 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 C19orf48Q6RUI8 117 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 TPRG1Q6ZUI0 275 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 NOSTRINQ8IVI9 506 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 LPPQ93052 612 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-211ENST00000429899 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.61
ATG4B-211ENST00000429899 ZMYND12Q9H0C1 365 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 TBC1D13Q9NVG8 400 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 FREM2Q5SZK8 3169 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 TENM4Q6N022 2769 aa11.27□□□□□ -0.61
ATG4B-211ENST00000429899 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 TEX28O15482 410 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 HRO43593 1189 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 PAPLNO95428 1278 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 C22orf31O95567 290 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 MCM4P33991 863 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 RPS9P46781 194 aaKnown RBP11.26□□□□□ -0.61
ATG4B-211ENST00000429899 NOVA1P51513 510 aaKnown RBP11.26□□□□□ -0.61
ATG4B-211ENST00000429899 NAPAP54920 295 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF252P-AS1Q0IIN9 211 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 NR5A1Q13285 461 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 SAFBQ15424 915 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4B-211ENST00000429899 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 RSPO2Q6UXX9 243 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-211ENST00000429899 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 ZNF280BQ86YH2 543 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-211ENST00000429899 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 ADAMTS10Q9H324 1103 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 JADE2Q9NQC1 790 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 ANKFY1Q9P2R3 1169 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 WASF3Q9UPY6 502 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 COL1A2P08123 1366 aa11.26□□□□□ -0.61
ATG4B-211ENST00000429899 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 IGKV6D-21A0A0A0MT36 114 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 CHURC1-FNTBB4DL54 471 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 HBP1O60381 514 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 ATG7O95352 703 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 ATP4AP20648 1035 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 FNTBP49356 437 aa11.25□□□□□ -0.61
ATG4B-211ENST00000429899 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
ATG4B-211ENST00000429899 NLRP5P59047 1200 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms