RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 SMIM24O75264 130 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 TJP3O95049 919 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 SGPL1O95470 568 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PDHA1P08559 390 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 IFI35P80217 286 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 HGSNATQ68CP4 663 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 RHOT1Q8IXI2 618 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 C4orf33Q8N1A6 199 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 GBP5Q96PP8 586 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 ALG13Q9NP73 1137 aaKnown RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 WDR64B1ANS9 1081 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 ZBTB39O15060 712 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 CDH16O75309 829 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 DCTN3O75935 186 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 ITGA8P53708 1063 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PTENP60484 403 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 APBB1IPQ7Z5R6 666 aaPredicted RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 RBM15Q96T37 977 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 CBWD1Q9BRT8 395 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 SCINQ9Y6U3 715 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 DCCP43146 1447 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 ARHGEF26Q96DR7 871 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 PURBQ96QR8 312 aaKnown RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 GANQ9H2C0 597 aa13.46□□□□□ -0.25
CPNE4-201ENST00000429747 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.25
CPNE4-201ENST00000429747 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 TNNC2P02585 160 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 ESRRAP11474 423 aaPredicted RBP13.46□□□□□ -0.26
CPNE4-201ENST00000429747 ITIH2P19823 946 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.26
CPNE4-201ENST00000429747 MAML1Q92585 1016 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 MSTO1Q9BUK6 570 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 TRAIPQ9BWF2 469 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.26
CPNE4-201ENST00000429747 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 YWHABP31946 246 aaKnown RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 NPEPPSP55786 919 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 AADACL2Q6P093 401 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 SPDL1Q96EA4 605 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 GOLGA8RI6L899 631 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 MCF2LO15068 1137 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 TNFRSF8P28908 595 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ARSEP51690 589 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 IRX4P78413 519 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ANKRD20A8PQ5CZ79 823 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 PLA2G4FQ68DD2 849 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 CYFIP1Q7L576 1253 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 SH3GL2Q99962 352 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 KIFC3Q9BVG8 833 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 YIPF3Q9GZM5 350 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 GABBR1Q9UBS5 961 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 TOPAZ1Q8N9V7 1692 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 SLC26A4O43511 780 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ADRA2BP18089 450 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 GNA15P30679 374 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ERICH1Q86X53 443 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ERP27Q96DN0 273 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 RBM41Q96IZ5 413 aaKnown RBP13.45□□□□□ -0.26
CPNE4-201ENST00000429747 TBC1D22BQ9NU19 505 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
CPNE4-201ENST00000429747 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 SHMT1P34896 483 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 SREBF1P36956 1147 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 ERFP50548 548 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 RAD23BP54727 409 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
CPNE4-201ENST00000429747 P3H1Q32P28 736 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 DARS2Q6PI48 645 aaKnown RBP13.44□□□□□ -0.26
CPNE4-201ENST00000429747 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 KCTD6Q8NC69 237 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 TRABDQ9H4I3 376 aa13.44□□□□□ -0.26
CPNE4-201ENST00000429747 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms