RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 GIT2Q14161 759 aa17.56■□□□□ 0.4
RHBDF1-204ENST00000428730 DSTYKQ6XUX3 929 aa17.56■□□□□ 0.4
RHBDF1-204ENST00000428730 ARHGAP22Q7Z5H3 698 aa17.56■□□□□ 0.4
RHBDF1-204ENST00000428730 LRRC8CQ8TDW0 803 aa17.56■□□□□ 0.4
RHBDF1-204ENST00000428730 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
RHBDF1-204ENST00000428730 ESYT2A0FGR8 921 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 ANKRD62A6NC57 917 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 ECEL1O95672 775 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 TTC4O95801 387 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 TRIM49P0CI25 452 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 TRIM49CP0CI26 452 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 ATP5DP30049 168 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 HOXA7P31268 230 aaPredicted RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 YARSP54577 528 aaKnown RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 TMED2Q15363 201 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 GRIK5Q16478 980 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CBWD6Q4V339 395 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CBWD3Q5JTY5 395 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CBWD5Q5RIA9 395 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 SLC13A5Q86YT5 568 aaPredicted RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 ADAM33Q9BZ11 813 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 UBE2OQ9C0C9 1292 aaKnown RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 GRID1Q9ULK0 1009 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 USP20Q9Y2K6 914 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 COL5A2P05997 1499 aaPredicted RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 KRT36O76013 467 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 KCNA3P22001 575 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 POLD1P28340 1107 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 MOGSQ13724 837 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 RCN1Q15293 331 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CCDC6Q16204 474 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 TAF1BQ53T94 588 aaPredicted RBP17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CMPK2Q5EBM0 449 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 SNX30Q5VWJ9 437 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 IRGCQ6NXR0 463 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 RUSC1Q9BVN2 902 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 NINJ2Q9NZG7 142 aa17.55■□□□□ 0.4
RHBDF1-204ENST00000428730 CALUO43852 315 aaPredicted RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 TOM1O60784 492 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 FTLP02792 175 aaPredicted RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 CUL3Q13618 768 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 CERKLQ49MI3 558 aaPredicted RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 RNF207Q6ZRF8 634 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 EPM2AIP1Q7L775 607 aaPredicted RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 KIAA0825Q8IV33 1275 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 RPUSD2Q8IZ73 545 aaKnown RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 DTX3LQ8TDB6 740 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 SCG3Q8WXD2 468 aaKnown RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 INPP5DQ92835 1189 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 C9orf72Q96LT7 481 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 DDX50Q9BQ39 737 aaKnown RBP17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 STK33Q9BYT3 514 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 VCXQ9H320 206 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 GPCPD1Q9NPB8 672 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 LMCD1Q9NZU5 365 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 SCOCQ9UIL1 159 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 USH1CQ9Y6N9 552 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 KDM3AQ9Y4C1 1321 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 CLDN3O15551 220 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 GCNT3O95395 438 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 BAG3O95817 575 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 CACNA2D1P54289 1103 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 WASHC2DQ5SRD0 308 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 HYIQ5T013 277 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
RHBDF1-204ENST00000428730 RASA4BC9J798 803 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 MAPK13O15264 365 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 RASA4O43374 803 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 PPP1R11O60927 126 aaPredicted RBP17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 EYA4O95677 639 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 HSPA6P17066 643 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 HIBADHP31937 336 aaKnown RBP17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 SERPINB4P48594 390 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 ITGA8P53708 1063 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 IL9RQ01113 521 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 COG2Q14746 738 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 RHBDF2Q6PJF5 856 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.43e-14■■■■■ 465.8
RHBDF1-204ENST00000428730 ADGRA3Q8IWK6 1321 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 FOXN3O00409 490 aaPredicted RBP17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 PYGBP11216 843 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 GRAMD1AQ96CP6 724 aa17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 RBM41Q96IZ5 413 aaKnown RBP17.53■□□□□ 0.4
RHBDF1-204ENST00000428730 PDXKO00764 312 aa17.52■□□□□ 0.4
RHBDF1-204ENST00000428730 ATP5HO75947 161 aa17.52■□□□□ 0.4
RHBDF1-204ENST00000428730 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
RHBDF1-204ENST00000428730 VHLP40337 213 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms