RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TMEM132AQ24JP5 1023 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 ATAT1Q5SQI0 421 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 TAS1R1Q7RTX1 841 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 NOSTRINQ8IVI9 506 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 FBXL6Q8N531 539 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 FBXO18Q8NFZ0 1043 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 BSNDQ8WZ55 320 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 ASIC4Q96FT7 647 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 SH2B1Q9NRF2 756 aaPredicted RBP18.91■□□□□ 0.62
TRIM39-209ENST00000428728 CACNG4Q9UBN1 327 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 PARP2Q9UGN5 583 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 ZDBF2Q9HCK1 2354 aa18.91■□□□□ 0.62
TRIM39-209ENST00000428728 CITO14578 2027 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 LILRB3O75022 631 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 NR1I2O75469 434 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 ASGR2P07307 311 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 MYBP10242 640 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 RPA1P27694 616 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 GLUD2P49448 558 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 RBM25P49756 843 aaKnown RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 GRIK3Q13003 919 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 CDCA2Q69YH5 1023 aaPredicted RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 PADI6Q6TGC4 694 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 RABGGTAQ92696 567 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 KIF2CQ99661 725 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 SMOC2Q9H3U7 446 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 MAN1C1Q9NR34 630 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 PRMT7Q9NVM4 692 aaPredicted RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
TRIM39-209ENST00000428728 SORCS3Q9UPU3 1222 aa18.9■□□□□ 0.62
TRIM39-209ENST00000428728 DOCK8Q8NF50 2099 aa18.89■□□□□ 0.62
TRIM39-209ENST00000428728 A0A1B0GUA9 196 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 ADH1AP07327 375 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 CCT6AP40227 531 aaKnown RBP18.89■□□□□ 0.61
TRIM39-209ENST00000428728 MTMR3Q13615 1198 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 C8orf34Q49A92 452 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 HAUS3Q68CZ6 603 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 B3GALT6Q96L58 329 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 PRIMPOLQ96LW4 560 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 COLEC11Q9BWP8 271 aa18.89■□□□□ 0.61
TRIM39-209ENST00000428728 N4BP3O15049 544 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 TEX28O15482 410 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 BRD1O95696 1058 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 PDGFBP01127 241 aaPredicted RBP18.88■□□□□ 0.61
TRIM39-209ENST00000428728 PRKCBP05771 671 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 VCPP55072 806 aaKnown RBP18.88■□□□□ 0.61
TRIM39-209ENST00000428728 ECM1Q16610 540 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 IER5LQ5T953 404 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 FUT10Q6P4F1 479 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 CCDC149Q6ZUS6 474 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 GPR149Q86SP6 731 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 GLYCTKQ8IVS8 523 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
TRIM39-209ENST00000428728 GSTCDQ8NEC7 633 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 PRSS33Q8NF86 280 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 KIFC3Q9BVG8 833 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 C2orf40Q9H1Z8 148 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 PDZD7Q9H5P4 517 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 POLD4Q9HCU8 107 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 USP20Q9Y2K6 914 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 ZMYM2Q9UBW7 1377 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 WDFY4Q6ZS81 3184 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 DOCK6Q96HP0 2047 aa18.88■□□□□ 0.61
TRIM39-209ENST00000428728 GLUD1P00367 558 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 EDN1P05305 212 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 CYP11B2P19099 503 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 TRAPPC10P48553 1259 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM39-209ENST00000428728 PRPF4BQ13523 1007 aaKnown RBP18.87■□□□□ 0.61
TRIM39-209ENST00000428728 PDCD11Q14690 1871 aaKnown RBP18.87■□□□□ 0.61
TRIM39-209ENST00000428728 MAPK6Q16659 721 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 FAM187BQ17R55 369 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 DEPTORQ8TB45 409 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 GPR62Q9BZJ7 368 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 BHMT2Q9H2M3 363 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 FZD8Q9H461 694 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 LIMD1Q9UGP4 676 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
TRIM39-209ENST00000428728 CASTOR2A6NHX0 329 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 RECQL4O94761 1208 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 EFEMP2O95967 443 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
TRIM39-209ENST00000428728 NAMPTP43490 491 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 MRE11P49959 708 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 DSG1Q02413 1049 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 PPP2R5AQ15172 486 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 KIAA0319Q5VV43 1072 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 UBALD2Q8IYN6 164 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 ZDHHC14Q8IZN3 488 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 SNX29Q8TEQ0 813 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 PAAF1Q9BRP4 392 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 ADPGKQ9BRR6 497 aa18.86■□□□□ 0.61
TRIM39-209ENST00000428728 CCDC113Q9H0I3 377 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms