RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 LUZP1Q86V48 1076 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 PLA2G4DQ86XP0 818 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 CRIPAKQ8N1N5 446 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 SEPT1Q8WYJ6 367 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 DNAJC25Q9H1X3 360 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 ENTPD7Q9NQZ7 604 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 CYP26B1Q9NR63 512 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 SETD4Q9NVD3 440 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 ANGPTL2Q9UKU9 493 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF215Q9UL58 517 aaPredicted RBP9.64□□□□□ -0.87
HDAC1-202ENST00000428704 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
HDAC1-202ENST00000428704 IGKV6D-21A0A0A0MT36 114 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 ATG7O95352 703 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 CHRNA1P02708 482 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-202ENST00000428704 MARK3P27448 753 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 CIITAP33076 1130 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 GATMP50440 423 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 NR5A1Q13285 461 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 CT47A1Q5JQC4 288 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-202ENST00000428704 MARCH8Q5T0T0 291 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 NT5DC1Q5TFE4 455 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 RUFY4Q6ZNE9 571 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 KRBA2Q6ZNG9 492 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 C1orf210Q8IVY1 113 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 ACSF2Q96CM8 615 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-202ENST00000428704 MRFAP1L1Q96HT8 127 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 TCF25Q9BQ70 676 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 ERAP1Q9NZ08 941 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 PUF60Q9UHX1 559 aaKnown RBP9.63□□□□□ -0.87
HDAC1-202ENST00000428704 HOOK1Q9UJC3 728 aaKnown RBP9.63□□□□□ -0.87
HDAC1-202ENST00000428704 KCNH3Q9ULD8 1083 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 LRFN2Q9ULH4 789 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 PCDHA4Q9UN74 947 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 PCDHB6Q9Y5E3 794 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 PCDHB3Q9Y5E6 796 aa9.63□□□□□ -0.87
HDAC1-202ENST00000428704 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 MBLAC1A4D2B0 266 aaPredicted RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 GOLGA6L19H0YKK7 550 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 DDX39AO00148 427 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 IPO5O00410 1097 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 IKBKBO14920 756 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 SPTLC1O15269 473 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 EOMESO95936 686 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 PTMAP06454 111 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 DCNP07585 359 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF76P36508 570 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 ZNF75DP51815 510 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 TERF1P54274 439 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 NLRP5P59047 1200 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 SETQ01105 290 aaPredicted RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 GRIK4Q16099 956 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 ATAT1Q5SQI0 421 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 RARS2Q5T160 578 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 ABHD15Q6UXT9 468 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 TSHZ1Q6ZSZ6 1077 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 C11orf57Q6ZUT1 292 aaPredicted RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 RSPH3Q86UC2 560 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 CCDC60Q8IWA6 550 aaPredicted RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 DHX40Q8IX18 779 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 BLIDQ8IZY5 108 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 TBCKQ8TEA7 893 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 LINC01599Q8WXQ3 324 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 GLG1Q92896 1179 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 ZBTB10Q96DT7 871 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 PYM1Q9BRP8 204 aaKnown RBP9.62□□□□□ -0.87
HDAC1-202ENST00000428704 SMARCAD1Q9H4L7 1026 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 TBC1D17Q9HA65 648 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 HCFC2Q9Y5Z7 792 aa9.62□□□□□ -0.87
HDAC1-202ENST00000428704 EVPLQ92817 2033 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ZFYVE26Q68DK2 2539 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ARID2Q68CP9 1835 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 NRCAMQ92823 1304 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ASPMQ8IZT6 3477 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 HIDE1A8MVS5 230 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 BECN2A8MW95 431 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 OFD1O75665 1012 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 TDP2O95551 362 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 INSRRP14616 1297 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 CD52P31358 61 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 SARSP49591 514 aaKnown RBP9.61□□□□□ -0.87
HDAC1-202ENST00000428704 USP46P62068 366 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ATP2C1P98194 919 aaPredicted RBP9.61□□□□□ -0.87
HDAC1-202ENST00000428704 MGAT3Q09327 533 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 PLCB4Q15147 1175 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 LONRF3Q496Y0 759 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 PRR16Q569H4 304 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 FBXO47Q5MNV8 452 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 ARL6IP4Q66PJ3 421 aaKnown RBP9.61□□□□□ -0.87
HDAC1-202ENST00000428704 KIAA1841Q6NSI8 718 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 TMC7Q7Z402 723 aa9.61□□□□□ -0.87
HDAC1-202ENST00000428704 TRIML1Q8N9V2 468 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms