RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 RAD23BP54727 409 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 RHBDL3P58872 404 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 GPSM2P81274 684 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 Q4G0T1 1027 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TEX9Q8N6V9 391 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 ART4Q93070 314 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 ACCSQ96QU6 501 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TXLNGYQ9BZA5 131 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 AJAP1Q9UKB5 411 aaPredicted RBP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 IGSF9BQ9UPX0 1349 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 RARAP10276 462 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 BNIP1Q12981 228 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 KIF22Q14807 665 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 BZW1Q7L1Q6 419 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 PRCCQ92733 491 aaPredicted RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 POC1B-GALNT4F8VUJ3 575 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 MSH4O15457 936 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 PPP1R11O60927 126 aaPredicted RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 SMIM24O75264 130 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 PTGIRP43119 386 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 LMNB2Q03252 620 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ALCAMQ13740 583 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 LIN9Q5TKA1 542 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 DCAF12L1Q5VU92 463 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ZNF449Q6P9G9 518 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 TRMT1LQ7Z2T5 733 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ATL2Q8NHH9 583 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 SLC20A1Q8WUM9 679 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 STMN2Q93045 179 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 NT5C1BQ96P26 610 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 NUDCD1Q96RS6 583 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CHORDC1Q9UHD1 332 aaPredicted RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ANAPC7Q9UJX3 599 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 FAM47DPA6NHR8 397 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 P4HA2O15460 535 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CBWD6Q4V339 395 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CBWD3Q5JTY5 395 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CBWD5Q5RIA9 395 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ANKRD20A3Q5VUR7 823 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 ERP27Q96DN0 273 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 DDX23Q9BUQ8 820 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 KRT16P08779 473 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 SPATA31C1P0DKV0 1188 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CA4P22748 312 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 CTNNA2P26232 953 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 RRP1BQ14684 758 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 MCUR1Q96AQ8 359 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 MRRFQ96E11 262 aaKnown RBP11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 FAM81BQ96LP2 452 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 SH3GL3Q99963 347 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 OSBPL1AQ9BXW6 950 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 GTF3C4Q9UKN8 822 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 EXOC7Q9UPT5 735 aa11.5□□□□□ -0.57
ATP2C1-204ENST00000428331 BBOX1O75936 387 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 LMNAP02545 664 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 PDE6BP35913 854 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 MARCKSL1P49006 195 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SCNN1DP51172 638 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 ITGA8P53708 1063 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SNAP25P60880 206 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 RNASELQ05823 741 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 TCP10Q12799 353 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 CCDC127Q96BQ5 260 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 NAF1Q96HR8 494 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SREBF1P36956 1147 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 C6orf163Q5TEZ5 329 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 TEKT3Q9BXF9 490 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 CYP26A1O43174 497 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 SKIV2L2P42285 1042 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 PRELPP51888 382 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 HADHBP55084 474 aaKnown RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 TBC1D16Q8TBP0 767 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 KCND2Q9NZV8 630 aa11.49□□□□□ -0.57
ATP2C1-204ENST00000428331 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms