RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CEBPZQ03701 1054 aaKnown RBP22.74■■□□□ 1.23
HSPG2-205ENST00000427897 STRN3Q13033 797 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 DCAF4L1Q3SXM0 396 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 ATF7IP2Q5U623 682 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 TMEM173Q86WV6 379 aaPredicted RBP22.74■■□□□ 1.23
HSPG2-205ENST00000427897 GJD3Q8N144 294 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 POP1Q99575 1024 aaKnown RBP22.74■■□□□ 1.23
HSPG2-205ENST00000427897 TCHPQ9BT92 498 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 CCDC113Q9H0I3 377 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 ZSCAN16Q9H4T2 348 aaPredicted RBP22.74■■□□□ 1.23
HSPG2-205ENST00000427897 MIOSQ9NXC5 875 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 SNTG2Q9NY99 539 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 CLEC1BQ9P126 229 aa22.74■■□□□ 1.23
HSPG2-205ENST00000427897 TDRD15B5MCY1 1934 aaKnown RBP22.73■■□□□ 1.23
HSPG2-205ENST00000427897 SPDYE4A6NLX3 237 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 CTSAP10619 480 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 GUCY2CP25092 1073 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 COLGALT2Q8IYK4 626 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 AUTS2Q8WXX7 1259 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 CASP10Q92851 521 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 MSLNLQ96KJ4 702 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 EMILIN2Q9BXX0 1053 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 ZBP1Q9H171 429 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 TMEM134Q9H6X4 195 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 KCND2Q9NZV8 630 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 SSX2IPQ9Y2D8 614 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 GDAQ9Y2T3 454 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 CLIC4Q9Y696 253 aa22.73■■□□□ 1.23
HSPG2-205ENST00000427897 TTLL13PA6NNM8 815 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 STX6O43752 255 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 GLP2RO95838 553 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 RBM10P98175 930 aaKnown RBP22.72■■□□□ 1.23
HSPG2-205ENST00000427897 GRIK3Q13003 919 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 COASYQ13057 564 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 SMAD2Q15796 467 aaKnown RBP22.72■■□□□ 1.23
HSPG2-205ENST00000427897 KIAA1841Q6NSI8 718 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 BCL7CQ8WUZ0 217 aaPredicted RBP22.72■■□□□ 1.23
HSPG2-205ENST00000427897 SNX21Q969T3 373 aa22.72■■□□□ 1.23
HSPG2-205ENST00000427897 MRPL4Q9BYD3 311 aaKnown RBP22.72■■□□□ 1.23
HSPG2-205ENST00000427897 MRPL17Q9NRX2 175 aaKnown RBP22.72■■□□□ 1.23
HSPG2-205ENST00000427897 INPPL1O15357 1258 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 SLC16A4O15374 487 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 B4GALT3O60512 393 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 URODP06132 367 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 THP07101 528 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 MARCKSP29966 332 aaPredicted RBP22.71■■□□□ 1.23
HSPG2-205ENST00000427897 TXLNAP40222 546 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 SLC12A3P55017 1021 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 RESTQ13127 1097 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 TPRNQ4KMQ1 711 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 TMEM119Q4V9L6 283 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 ADHFE1Q8IWW8 467 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 DAW1Q8N136 415 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 LARSQ9P2J5 1176 aaKnown RBP22.71■■□□□ 1.23
HSPG2-205ENST00000427897 CCDC39Q9UFE4 941 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 VCANP13611 3396 aa22.71■■□□□ 1.23
HSPG2-205ENST00000427897 C2CD2LO14523 706 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 CLASP2O75122 1294 aaKnown RBP22.7■■□□□ 1.22
HSPG2-205ENST00000427897 TADA2AO75478 443 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 RECQL4O94761 1208 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 PLS3P13797 630 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 KLRC2P26717 231 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 MATR3P43243 847 aaKnown RBP eCLIP22.7■■□□□ 1.22
HSPG2-205ENST00000427897 YARSP54577 528 aaKnown RBP22.7■■□□□ 1.22
HSPG2-205ENST00000427897 KARSQ15046 597 aaKnown RBP22.7■■□□□ 1.22
HSPG2-205ENST00000427897 NT5DC1Q5TFE4 455 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 EEF1DP3Q658K8 133 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 CES5AQ6NT32 575 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 ANKRD54Q6NXT1 300 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 FAM173BQ6P4H8 233 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 PPFIBP1Q86W92 1011 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 GPBP1Q86WP2 473 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 SMRP1Q8NCR6 262 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 CCDC94Q9BW85 323 aaPredicted RBP22.7■■□□□ 1.22
HSPG2-205ENST00000427897 APOL5Q9BWW9 433 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 ZHX3Q9H4I2 956 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 TNFSF13BQ9Y275 285 aa22.7■■□□□ 1.22
HSPG2-205ENST00000427897 ZMYM2Q9UBW7 1377 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 H0YCG3 227 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 HOXB8P17481 243 aaPredicted RBP22.69■■□□□ 1.22
HSPG2-205ENST00000427897 PLCG1P19174 1290 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 DSC1Q08554 894 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 MAPK7Q13164 816 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 ZNF568Q3ZCX4 644 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 TMEM184AQ6ZMB5 413 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 ZBTB33Q86T24 672 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 VN1R2Q8NFZ6 395 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 ACO2Q99798 780 aaKnown RBP22.69■■□□□ 1.22
HSPG2-205ENST00000427897 MTMR6Q9Y217 621 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 USP15Q9Y4E8 981 aaPredicted RBP22.69■■□□□ 1.22
HSPG2-205ENST00000427897 HCFC2Q9Y5Z7 792 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 IRAK3Q9Y616 596 aa22.69■■□□□ 1.22
HSPG2-205ENST00000427897 NPHP3-ACAD11A0A0J9YXS1 232 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 FAM13AO94988 1023 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 SOD2P04179 222 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 CACNB1Q02641 598 aaPredicted RBP22.68■■□□□ 1.22
HSPG2-205ENST00000427897 GRIN1Q05586 938 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 SPECC1Q5M775 1068 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 MYCT1Q8N699 235 aa22.68■■□□□ 1.22
HSPG2-205ENST00000427897 SPIRE2Q8WWL2 714 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms