RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 NPHP3-ACAD11A0A0J9YXS1 232 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 N4BP3O15049 544 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 PLA2G4BP0C869 781 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 RAD51AP2Q09MP3 1159 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 SMAD4Q13485 552 aaKnown RBP21.13■□□□□ 0.97
COL9A2-204ENST00000427563 SMC1AQ14683 1233 aaKnown RBP21.13■□□□□ 0.97
COL9A2-204ENST00000427563 SMAD2Q15796 467 aaKnown RBP21.13■□□□□ 0.97
COL9A2-204ENST00000427563 TMEM184AQ6ZMB5 413 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 USP49Q70CQ1 688 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 AK8Q96MA6 479 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 CACNG4Q9UBN1 327 aa21.13■□□□□ 0.97
COL9A2-204ENST00000427563 CLASP2O75122 1294 aaKnown RBP21.12■□□□□ 0.97
COL9A2-204ENST00000427563 CTSAP10619 480 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 ZP2Q05996 745 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 TAS1R1Q7RTX1 841 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 RNF168Q8IYW5 571 aaPredicted RBP21.12■□□□□ 0.97
COL9A2-204ENST00000427563 NT5C3AQ9H0P0 336 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 SNTG2Q9NY99 539 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 PARP2Q9UGN5 583 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
COL9A2-204ENST00000427563 PRG3Q9Y2Y8 225 aaPredicted RBP21.12■□□□□ 0.97
COL9A2-204ENST00000427563 ZMYM2Q9UBW7 1377 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 CCDC169A6NNP5 214 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 PTGESO14684 152 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 CXCL14O95715 111 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 BMP15O95972 392 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 ALDH2P05091 517 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 SSBP05455 408 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL9A2-204ENST00000427563 EFNA5P52803 228 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 CACNB1Q02641 598 aaPredicted RBP21.11■□□□□ 0.97
COL9A2-204ENST00000427563 KARSQ15046 597 aaKnown RBP21.11■□□□□ 0.97
COL9A2-204ENST00000427563 LLGL2Q6P1M3 1020 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 SYCE2Q6PIF2 218 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 KCTD17Q8N5Z5 321 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 FEZF2Q8TBJ5 459 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 DRC1Q96MC2 740 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 FAM193BQ96PV7 902 aaPredicted RBP21.11■□□□□ 0.97
COL9A2-204ENST00000427563 FBXO2Q9UK22 296 aaPredicted RBP21.11■□□□□ 0.97
COL9A2-204ENST00000427563 IRAK3Q9Y616 596 aa21.11■□□□□ 0.97
COL9A2-204ENST00000427563 PHLPP2Q6ZVD8 1323 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 PLXNA3P51805 1871 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 C19orf67A6NJJ6 358 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 K7ERI5 159 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 ABLIM1O14639 778 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 SLC16A4O15374 487 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 LILRB3O75022 631 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 RECQL4O94761 1208 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 PLCG1P19174 1290 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 MARCKSP29966 332 aaPredicted RBP21.1■□□□□ 0.97
COL9A2-204ENST00000427563 LONP1P36776 959 aaKnown RBP21.1■□□□□ 0.97
COL9A2-204ENST00000427563 OR1G1P47890 313 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 NAB2Q15742 525 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 SPECC1Q5M775 1068 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 ATF7IP2Q5U623 682 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 RABGGTAQ92696 567 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 EPSTI1Q96J88 318 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 USP28Q96RU2 1077 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 ACO2Q99798 780 aaKnown RBP21.1■□□□□ 0.97
COL9A2-204ENST00000427563 PAAF1Q9BRP4 392 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 S1PR5Q9H228 398 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 TMEM134Q9H6X4 195 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 PTPRHQ9HD43 1115 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 HCFC2Q9Y5Z7 792 aa21.1■□□□□ 0.97
COL9A2-204ENST00000427563 CARNS1A5YM72 827 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 SLC26A4O43511 780 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 STX6O43752 255 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 DMP1Q13316 513 aaPredicted RBP21.09■□□□□ 0.97
COL9A2-204ENST00000427563 MCM6Q14566 821 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 ANKRD54Q6NXT1 300 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 HACE1Q8IYU2 909 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 GJD3Q8N144 294 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 CEP120Q8N960 986 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 CLIC6Q96NY7 704 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 NTPCRQ9BSD7 190 aaKnown RBP21.09■□□□□ 0.97
COL9A2-204ENST00000427563 TIPINQ9BVW5 301 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 TARS2Q9BW92 718 aaKnown RBP21.09■□□□□ 0.97
COL9A2-204ENST00000427563 EPHX3Q9H6B9 360 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 KMT5AQ9NQR1 393 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 CDH22Q9UJ99 828 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 TNFSF13BQ9Y275 285 aa21.09■□□□□ 0.97
COL9A2-204ENST00000427563 USP15Q9Y4E8 981 aaPredicted RBP21.09■□□□□ 0.97
COL9A2-204ENST00000427563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.08■□□□□ 0.97
COL9A2-204ENST00000427563 PLS3P13797 630 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 UBA7P41226 1012 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 GRIK3Q13003 919 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 ADHFE1Q8IWW8 467 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 TMEM161BQ8NDZ6 487 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 SLC22A17Q8WUG5 538 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 SPIRE2Q8WWL2 714 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 SUSD6Q92537 303 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 CDK5RAP3Q96JB5 506 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 HERC2P3Q9BVR0 1158 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 APOL5Q9BWW9 433 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 CCSER1Q9C0I3 900 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 CDT1Q9H211 546 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 C17orf75Q9HAS0 396 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 PRKAG3Q9UGI9 489 aa21.08■□□□□ 0.97
COL9A2-204ENST00000427563 MEFVO15553 781 aaPredicted RBP21.07■□□□□ 0.96
COL9A2-204ENST00000427563 PROZP22891 400 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms