RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CDR2LQ86X02 465 aaPredicted RBP11.17□□□□□ -0.62
GACAT3-201ENST00000426539 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 CNNM3Q8NE01 707 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
GACAT3-201ENST00000426539 EMILIN2Q9BXX0 1053 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 NXF3Q9H4D5 531 aaKnown RBP11.17□□□□□ -0.62
GACAT3-201ENST00000426539 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 BRMS1Q9HCU9 246 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 DBR1Q9UK59 544 aaKnown RBP11.17□□□□□ -0.62
GACAT3-201ENST00000426539 SORCS3Q9UPU3 1222 aa11.17□□□□□ -0.62
GACAT3-201ENST00000426539 ZDBF2Q9HCK1 2354 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 C2CD2LO14523 706 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 TEX28O15482 410 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 MED24O75448 989 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 AKAP5P24588 427 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 OR1G1P47890 313 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 NEK4P51957 841 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 TFDP1Q14186 410 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 UBALD2Q8IYN6 164 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
GACAT3-201ENST00000426539 RPS6KC1Q96S38 1066 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 APOL6Q9BWW8 343 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 POLR3FQ9H1D9 316 aaPredicted RBP11.16□□□□□ -0.62
GACAT3-201ENST00000426539 OCEL1Q9H607 264 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 MRPL17Q9NRX2 175 aaKnown RBP11.16□□□□□ -0.62
GACAT3-201ENST00000426539 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 USTQ9Y2C2 406 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 KMT2EQ8IZD2 1858 aa11.16□□□□□ -0.62
GACAT3-201ENST00000426539 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 ARID2Q68CP9 1835 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 A0A1B0GUA9 196 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 USO1O60763 962 aaKnown RBP11.15□□□□□ -0.62
GACAT3-201ENST00000426539 NPTXRO95502 500 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 URODP06132 367 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.62
GACAT3-201ENST00000426539 ATP2B1P20020 1258 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 GUCY1B3Q02153 619 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 CATSPER3Q86XQ3 398 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 RABGGTAQ92696 567 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 B3GALT6Q96L58 329 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 PRRX2Q99811 253 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 CXCL16Q9H2A7 254 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 CHST7Q9NS84 486 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 FAM86C1Q9NVL1 165 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.62
GACAT3-201ENST00000426539 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
GACAT3-201ENST00000426539 EDN1P05305 212 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 NEFLP07196 543 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 MYBP10242 640 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 MCM7P33993 719 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 GLUD2P49448 558 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 DSG1Q02413 1049 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 CDCA2Q69YH5 1023 aaPredicted RBP11.14□□□□□ -0.63
GACAT3-201ENST00000426539 SLC27A1Q6PCB7 646 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 C15orf39Q6ZRI6 1047 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 CMASQ8NFW8 434 aaPredicted RBP11.14□□□□□ -0.63
GACAT3-201ENST00000426539 FZD8Q9H461 694 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 KLK14Q9P0G3 267 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 USP20Q9Y2K6 914 aa11.14□□□□□ -0.63
GACAT3-201ENST00000426539 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 RFPL2O75678 378 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 PAPLNO95428 1278 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 ADH1AP07327 375 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
GACAT3-201ENST00000426539 TRIM29Q14134 588 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 ZNF174Q15697 407 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 FAM187BQ17R55 369 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 FUT10Q6P4F1 479 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 CCDC149Q6ZUS6 474 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
GACAT3-201ENST00000426539 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 POLR3CQ9BUI4 534 aaPredicted RBP11.13□□□□□ -0.63
GACAT3-201ENST00000426539 COLEC11Q9BWP8 271 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
GACAT3-201ENST00000426539 PARP2Q9UGN5 583 aa11.13□□□□□ -0.63
GACAT3-201ENST00000426539 DENND4AQ7Z401 1863 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 H0Y858 1186 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 PTGESO14684 152 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 GLUD1P00367 558 aa11.12□□□□□ -0.63
GACAT3-201ENST00000426539 OR52Z1P0C646 297 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms