RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 BLIDQ8IZY5 108 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 SUMF1Q8NBK3 374 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 CPB2Q96IY4 423 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
PDAP1-202ENST00000426447 GPR62Q9BZJ7 368 aa16.34■□□□□ 0.21
PDAP1-202ENST00000426447 INO80B-WBP1J3KQ70 363 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 EFEMP2O95967 443 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 SDHBP21912 280 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CSTF1Q05048 431 aaKnown RBP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 EMC2Q15006 297 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 PCBP1Q15365 356 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 SLC44A4Q53GD3 710 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 XKR9Q5GH70 373 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 PARM1Q6UWI2 310 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 GPR161Q8N6U8 529 aaKnown RBP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 FGF14Q92915 247 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 SECISBP2LQ93073 1101 aaKnown RBP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CCDC51Q96ER9 411 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CNTNAP3BQ96NU0 1288 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CNTNAP3Q9BZ76 1288 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 ADAM28Q9UKQ2 775 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 CDH7Q9ULB5 785 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 POLIQ9UNA4 740 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
PDAP1-202ENST00000426447 EP300Q09472 2414 aaPredicted RBP16.33■□□□□ 0.2
PDAP1-202ENST00000426447 FAM170BA6NMN3 283 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 TSPAN1O60635 241 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 PAPLNO95428 1278 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
PDAP1-202ENST00000426447 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
PDAP1-202ENST00000426447 PPP2R5CQ13362 524 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 NID2Q14112 1375 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 TFDP1Q14186 410 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
PDAP1-202ENST00000426447 INF2Q27J81 1249 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 ZNF528Q3MIS6 628 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 LIN9Q5TKA1 542 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 MTSS1LQ765P7 747 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 MAML2Q8IZL2 1156 aaPredicted RBP16.32■□□□□ 0.2
PDAP1-202ENST00000426447 FAM20AQ96MK3 541 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 MTRQ99707 1265 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 FBXO4Q9UKT5 387 aa16.32■□□□□ 0.2
PDAP1-202ENST00000426447 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 SPTLC1O15269 473 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 SLC37A4O43826 429 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 RPS6KB1P23443 525 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 AKAP5P24588 427 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 PTENP60484 403 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 NTHL1P78549 312 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 PRKCQQ04759 706 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 MLF2Q15773 248 aaPredicted RBP16.31■□□□□ 0.2
PDAP1-202ENST00000426447 PPM1LQ5SGD2 360 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 PRSS55Q6UWB4 352 aaPredicted RBP16.31■□□□□ 0.2
PDAP1-202ENST00000426447 CEP57Q86XR8 500 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 C4orf19Q8IY42 314 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 LXNQ9BS40 222 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
PDAP1-202ENST00000426447 WRAP73Q9P2S5 460 aaPredicted RBP16.31■□□□□ 0.2
PDAP1-202ENST00000426447 CPLX1O14810 134 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
PDAP1-202ENST00000426447 PFKPQ01813 784 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 EPHA7Q15375 998 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 ZBTB41Q5SVQ8 909 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 KRT25Q7Z3Z0 450 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 FGF13Q92913 245 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
PDAP1-202ENST00000426447 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 MTF2Q9Y483 593 aaPredicted RBP16.3■□□□□ 0.2
PDAP1-202ENST00000426447 PCDHGA2Q9Y5H1 932 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 SNX14Q9Y5W7 946 aa16.3■□□□□ 0.2
PDAP1-202ENST00000426447 CACNA1AO00555 2505 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.24e-6■■■■■ 47.1
PDAP1-202ENST00000426447 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 M0R2N6 131 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 NCAM2O15394 837 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 CCL16O15467 120 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 XYLBO75191 536 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 CDC45O75419 566 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 KRT37O76014 449 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 DEXIO95424 95 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 NPTXRO95502 500 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 C8AP07357 584 aa16.29■□□□□ 0.2
PDAP1-202ENST00000426447 ARF4P18085 180 aaPredicted RBP16.29■□□□□ 0.2
PDAP1-202ENST00000426447 CD72P21854 359 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms