RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 METTL13Q8N6R0 699 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 MSTO1Q9BUK6 570 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 CDC23Q9UJX2 597 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 GJB1P08034 283 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 MATR3P43243 847 aaKnown RBP eCLIP28.71■■■□□ 2.19
LDB1-202ENST00000425280 IGBP1P78318 339 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 SV2AQ7L0J3 742 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 C2orf40Q9H1Z8 148 aa28.71■■■□□ 2.19
LDB1-202ENST00000425280 FOXN3O00409 490 aaPredicted RBP28.7■■■□□ 2.19
LDB1-202ENST00000425280 ADCY6O43306 1168 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 CLDN10P78369 228 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 FMNL3Q8IVF7 1028 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 MNS1Q8NEH6 495 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 OR6J1Q8NGC5 347 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 TAS1R2Q8TE23 839 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 MRPL4Q9BYD3 311 aaKnown RBP28.7■■■□□ 2.19
LDB1-202ENST00000425280 SALL4Q9UJQ4 1053 aa28.7■■■□□ 2.19
LDB1-202ENST00000425280 LDHAP00338 332 aaKnown RBP28.7■■■□□ 2.18
LDB1-202ENST00000425280 HOXD8P13378 290 aaPredicted RBP28.7■■■□□ 2.18
LDB1-202ENST00000425280 GPC3P51654 580 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 WNT7BP56706 349 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 AMPD2Q01433 879 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 TUBB2AQ13885 445 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 ZBTB41Q5SVQ8 909 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 ZNF710Q8N1W2 664 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 FBXL13Q8NEE6 735 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 OLIG1Q8TAK6 271 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 VTI1AQ96AJ9 217 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 TUBB2BQ9BVA1 445 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 NENFQ9UMX5 172 aa28.7■■■□□ 2.18
LDB1-202ENST00000425280 FAM155AB1AL88 458 aaPredicted RBP28.69■■■□□ 2.18
LDB1-202ENST00000425280 MOCS3O95396 460 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 PRKCBP05771 671 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 MMP3P08254 477 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 INHBEP58166 350 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 TFDP1Q14186 410 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 ZNF516Q92618 1163 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 PACSIN1Q9BY11 444 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 FLRT1Q9NZU1 646 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 NAGPAQ9UK23 515 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 CAPN6Q9Y6Q1 641 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 EVPLQ92817 2033 aa28.69■■■□□ 2.18
LDB1-202ENST00000425280 DCAF8L1A6NGE4 600 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 HSP90AA2PQ14568 343 aaPredicted RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 MAPK6Q16659 721 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 PRAMEF19Q5SWL8 479 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 C10orf76Q5T2E6 689 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 VPS36Q86VN1 386 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 NLRP4Q96MN2 994 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 ACO2Q99798 780 aaKnown RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.68■■■□□ 2.182e-11■■■■■ 138.8
LDB1-202ENST00000425280 RAB20Q9NX57 234 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 H3BRB1 525 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 ENC1O14682 589 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 TACC1O75410 805 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 ATP1A1P05023 1023 aaKnown RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 HOXC6P09630 235 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 CCDC172P0C7W6 258 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 KLRC1P26715 233 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 KIF22Q14807 665 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 NAB2Q15742 525 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 C15orf39Q6ZRI6 1047 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 TRIM58Q8NG06 486 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 USP6NLQ92738 828 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 KAT5Q92993 513 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 ZNF668Q96K58 619 aaPredicted RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 FAM84AQ96KN4 292 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 SYT11Q9BT88 431 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 TUT1Q9H6E5 874 aaKnown RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 RBAKQ9NYW8 714 aaPredicted RBP28.68■■■□□ 2.18
LDB1-202ENST00000425280 TLL2Q9Y6L7 1015 aa28.68■■■□□ 2.18
LDB1-202ENST00000425280 COL1A2P08123 1366 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 DDX3XO00571 662 aaKnown RBP eCLIP28.67■■■□□ 2.184e-10■■■□□ 17.4
LDB1-202ENST00000425280 ASAP2O43150 1006 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 TADA3O75528 432 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 TOM1L1O75674 476 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 TNFAIP2Q03169 654 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 BMS1Q14692 1282 aaKnown RBP28.67■■■□□ 2.18
LDB1-202ENST00000425280 LINC01465Q8N7H1 131 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 FNBP1Q96RU3 617 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 PDE11AQ9HCR9 933 aa28.67■■■□□ 2.18
LDB1-202ENST00000425280 CLDN3O15551 220 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 KIAA0753Q2KHM9 967 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 ALKBH5Q6P6C2 394 aaKnown RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 ANKRD7Q92527 254 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 MAGEB2O15479 319 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 HARSP12081 509 aaKnown RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 PTENP60484 403 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 PAPD7Q5XG87 772 aaKnown RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 LMBRD2Q68DH5 695 aaPredicted RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 TRAPPC11Q7Z392 1133 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 RNF10Q8N5U6 811 aaKnown RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 SLC30A5Q8TAD4 765 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 LNX1Q8TBB1 728 aaPredicted RBP28.66■■■□□ 2.18
LDB1-202ENST00000425280 KREMEN1Q96MU8 473 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 HDAC6Q9UBN7 1215 aa28.66■■■□□ 2.18
LDB1-202ENST00000425280 DGKDQ16760 1214 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 PPM1KQ8N3J5 372 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 HELQQ8TDG4 1101 aa28.65■■■□□ 2.18
LDB1-202ENST00000425280 FZD8Q9H461 694 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms