RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CBWD1Q9BRT8 395 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
MDC1-205ENST00000425072 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 CHST12Q9NRB3 414 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 TRPV2Q9Y5S1 764 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 ZMYM2Q9UBW7 1377 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 DCDC2CA8MYV0 355 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 OGTO15294 1046 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 MCF2P10911 925 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 MCL1Q07820 350 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 SNX17Q15036 470 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
MDC1-205ENST00000425072 NOTUMQ6P988 496 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
MDC1-205ENST00000425072 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 PPP1R13LQ8WUF5 828 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
MDC1-205ENST00000425072 MFSD14AQ96MC6 490 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 OSMRQ99650 979 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 NUP58Q9BVL2 599 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 MINDY3Q9H8M7 445 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 PTPRHQ9HD43 1115 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 TAB2Q9NYJ8 693 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 IMPACTQ9P2X3 320 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.614e-7■□□□□ 10.9
MDC1-205ENST00000425072 CDY2AQ9Y6F7 541 aa11.25□□□□□ -0.61
MDC1-205ENST00000425072 A0A1W2PQC6 194 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 LGALS16A8MUM7 142 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 AP5Z1O43299 807 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 CHRNA1P02708 482 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 AFPP02771 609 aaKnown RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 TPM1P09493 284 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 ARF4P18085 180 aaPredicted RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 PROZP22891 400 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 GTF2H1P32780 548 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 CASP4P49662 377 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 VAMP7P51809 220 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 AP3M2P53677 418 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
MDC1-205ENST00000425072 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 SLC39A4Q6P5W5 647 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 SLC27A1Q6PCB7 646 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 APTXQ7Z2E3 356 aaKnown RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 NECAB2Q7Z6G3 386 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 IQCDQ96DY2 449 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 BORCS6Q96GS4 357 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 FNBP1Q96RU3 617 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 PPP1R16BQ96T49 567 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 TRMT13Q9NUP7 481 aaKnown RBP11.24□□□□□ -0.61
MDC1-205ENST00000425072 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
MDC1-205ENST00000425072 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 GOLGA8JA6NMD2 632 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 PMM2O15305 246 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 P4HA2O15460 535 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 B4GALT4O60513 344 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 TSPAN1O60635 241 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 N4BP1O75113 896 aaKnown RBP11.23□□□□□ -0.61
MDC1-205ENST00000425072 CSDE1O75534 798 aaKnown RBP11.23□□□□□ -0.61
MDC1-205ENST00000425072 CD4P01730 458 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 CLTAP09496 248 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 CKBP12277 381 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 BFSP1Q12934 665 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 AMHR2Q16671 573 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 ANKRD33Q7Z3H0 272 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 CD302Q8IX05 232 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 PARD3BQ8TEW8 1205 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 PDLIM2Q96JY6 352 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 ACAP3Q96P50 834 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 TSPAN18Q96SJ8 248 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 C11orf49Q9H6J7 331 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 RPF1Q9H9Y2 349 aaKnown RBP11.23□□□□□ -0.61
MDC1-205ENST00000425072 FRMPD3Q5JV73 1810 aa11.23□□□□□ -0.61
MDC1-205ENST00000425072 GTPBP10A4D1E9 387 aaKnown RBP11.22□□□□□ -0.61
MDC1-205ENST00000425072 TISP43B9A030 160 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 PITPNM1O00562 1244 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 TEX33O43247 280 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 IL18RAPO95256 599 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 COL6A1P12109 1028 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 SKIP12755 728 aa11.22□□□□□ -0.61
MDC1-205ENST00000425072 HOXA11P31270 313 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms