RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 WNT8AQ9H1J5 351 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 INSL6Q9Y581 213 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 SCNN1BP51168 640 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 SEC24CP53992 1094 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 BLOC1S1P78537 153 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 OCRLQ01968 901 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 SART3Q15020 963 aaKnown RBP6.97□□□□□ -1.29
LINC01040-201ENST00000425048 TCEA2Q15560 299 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 DDB1Q16531 1140 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 C19orf54Q5BKX5 351 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 ABHD17BQ5VST6 288 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 RD3Q7Z3Z2 195 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 LRRTM3Q86VH5 581 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 SYT12Q8IV01 421 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 TEX101Q9BY14 249 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 PRSS50Q9UI38 385 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 TMPRSS11EQ9UL52 423 aa6.97□□□□□ -1.29
LINC01040-201ENST00000425048 ZMYM3Q14202 1370 aa6.96□□□□□ -1.29
LINC01040-201ENST00000425048 ZNF185O15231 689 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 PPARAQ07869 468 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
LINC01040-201ENST00000425048 PRR16Q569H4 304 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 COLEC12Q5KU26 742 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 LRCH2Q5VUJ6 765 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 ANKS6Q68DC2 871 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 BTNL9Q6UXG8 535 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 FRMD7Q6ZUT3 714 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 SMC1BQ8NDV3 1235 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 ANO3Q9BYT9 981 aa6.96□□□□□ -1.3
LINC01040-201ENST00000425048 EVLQ9UI08 416 aaPredicted RBP6.96□□□□□ -1.3
LINC01040-201ENST00000425048 PRAMEF4O60810 478 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 ZNF37AP17032 561 aaPredicted RBP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 ATXN1P54253 815 aaKnown RBP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 MEF2AQ02078 507 aaPredicted RBP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 FOXI1Q12951 378 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 FBXO42Q6P3S6 717 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 CNNM4Q6P4Q7 775 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 PDZD4Q76G19 769 aaPredicted RBP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 GPR101Q96P66 508 aaPredicted RBP6.95□□□□□ -1.3
LINC01040-201ENST00000425048 WDR26Q9H7D7 661 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 ZSWIM4Q9H7M6 989 aa6.95□□□□□ -1.3
LINC01040-201ENST00000425048 LCHNA4D1U4 455 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 FAM83GA6ND36 823 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 UNC119BA6NIH7 251 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 GASTP01350 101 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 MXRA7P84157 204 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 TERF2Q15554 542 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 OR14C36Q8NHC7 312 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 ZFP28Q8NHY6 868 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 SNX33Q8WV41 574 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 NELL1Q92832 810 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 R3HDMLQ9H3Y0 253 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC01040-201ENST00000425048 SPTLC3Q9NUV7 552 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 FPGT-TNNI3KV9GXZ4 949 aa6.94□□□□□ -1.3
LINC01040-201ENST00000425048 RAB11FIP3O75154 756 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 ITGA10O75578 1167 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 CXCR5P32302 372 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 MANFP55145 182 aaKnown RBP6.93□□□□□ -1.3
LINC01040-201ENST00000425048 RESTQ13127 1097 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 PCBP1Q15365 356 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC01040-201ENST00000425048 FAM102AQ5T9C2 384 aaPredicted RBP6.93□□□□□ -1.3
LINC01040-201ENST00000425048 ABHD15Q6UXT9 468 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 LYSMD2Q8IV50 215 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 AHI1Q8N157 1196 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 RSAD1Q9HA92 442 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 USP15Q9Y4E8 981 aaPredicted RBP6.93□□□□□ -1.3
LINC01040-201ENST00000425048 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 SPATA31A6Q5VVP1 1343 aa6.93□□□□□ -1.3
LINC01040-201ENST00000425048 ESRRBO95718 433 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
LINC01040-201ENST00000425048 TYRP1P17643 537 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 ELLP55199 621 aaPredicted RBP6.92□□□□□ -1.3
LINC01040-201ENST00000425048 TP53BP2Q13625 1128 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 ARMC6Q6NXE6 501 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 C11orf74Q86VG3 221 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 SLC41A1Q8IVJ1 513 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 SIMC1Q8NDZ2 872 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 MDM1Q8TC05 714 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 SLC9A6Q92581 669 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 NINJ1Q92982 152 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 ADAM2Q99965 735 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 MS4A5Q9H3V2 200 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 GPRC5DQ9NZD1 345 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 MAP3K2Q9Y2U5 619 aa6.92□□□□□ -1.3
LINC01040-201ENST00000425048 COL11A2P13942 1736 aaPredicted RBP6.92□□□□□ -1.3
LINC01040-201ENST00000425048 SPDEFO95238 335 aa6.91□□□□□ -1.3
LINC01040-201ENST00000425048 LSSP48449 732 aa6.91□□□□□ -1.3
LINC01040-201ENST00000425048 TRIM25Q14258 630 aaKnown RBP6.91□□□□□ -1.3
LINC01040-201ENST00000425048 METRNLQ641Q3 311 aa6.91□□□□□ -1.3
LINC01040-201ENST00000425048 HOMER1Q86YM7 354 aa6.91□□□□□ -1.3
LINC01040-201ENST00000425048 RNF169Q8NCN4 708 aa6.91□□□□□ -1.3
LINC01040-201ENST00000425048 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms