RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 COL1A2P08123 1366 aa12.81□□□□□ -0.36
VSTM1-205ENST00000425006 CCDC195A0A1B0GUA6 201 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 SRRM3A6NNA2 597 aaPredicted RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 CHMP2AO43633 222 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 LAMP2P13473 410 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 GJB2P29033 226 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 HTR4Q13639 388 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 UGCGQ16739 394 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 CLLU1OSQ5K130 101 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 FAM228AQ86W67 206 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 TMEM173Q86WV6 379 aaPredicted RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 CELF5Q8N6W0 485 aaKnown RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 CMASQ8NFW8 434 aaPredicted RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 EMILIN2Q9BXX0 1053 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
VSTM1-205ENST00000425006 LOC400499M0QZD8 3231 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 COL4A3Q01955 1670 aa12.8□□□□□ -0.36
VSTM1-205ENST00000425006 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 ANHXE9PGG2 379 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 EML1O00423 815 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 CD72P21854 359 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 PRKCQQ04759 706 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 DSC3Q14574 896 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 MTHFD1LQ6UB35 978 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 NOSTRINQ8IVI9 506 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 HELQQ8TDG4 1101 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 KLHL5Q96PQ7 755 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 LTB4R2Q9NPC1 389 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
VSTM1-205ENST00000425006 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
VSTM1-205ENST00000425006 AKAP13Q12802 2813 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 NEMFO60524 1076 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 FOXD2O60548 495 aaPredicted RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 ZC3H11AO75152 810 aaKnown RBP eCLIP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 STBD1O95210 358 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 OATP04181 439 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 CNPP09543 421 aaKnown RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 KLRC1P26715 233 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 NRLP54845 237 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 ORC2Q13416 577 aaPredicted RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 CALCRLQ16602 461 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 AASDHQ4L235 1098 aaPredicted RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 CKAP2LQ8IYA6 745 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 SMG7Q92540 1137 aaKnown RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 FAM167AQ96KS9 214 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 OSMRQ99650 979 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.78□□□□□ -0.36
VSTM1-205ENST00000425006 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
VSTM1-205ENST00000425006 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 TAF4O00268 1085 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 TM4SF5O14894 197 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 INPPL1O15357 1258 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 C22orf31O95567 290 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 SSBP05455 408 aaKnown RBP eCLIP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 MYBP10242 640 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 PRKCEQ02156 737 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 EPHA7Q15375 998 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 KIZQ2M2Z5 673 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 KIAA0319LQ8IZA0 1049 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 BCL7CQ8WUZ0 217 aaPredicted RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 CLDN23Q96B33 292 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 CEP89Q96ST8 783 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
VSTM1-205ENST00000425006 NRBP2Q9NSY0 501 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 CEP131Q9UPN4 1083 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 LAMA5O15230 3695 aa12.77□□□□□ -0.37
VSTM1-205ENST00000425006 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 NCAM2O15394 837 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 MARCH6O60337 910 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 RFPL2O75678 378 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 KCNK5O95279 499 aa12.76□□□□□ -0.37
VSTM1-205ENST00000425006 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms