RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TNFSF13BQ9Y275 285 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PCDHGC5Q9Y5F6 944 aa24.54■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TCF20Q9UGU0 1960 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 INPPL1O15357 1258 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DDHD2O94830 711 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MAPTP10636 758 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ME1P48163 572 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SLC11A1P49279 550 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZNF131P52739 623 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 NCKAP1LP55160 1127 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 KRT17Q04695 432 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZNF568Q3ZCX4 644 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 APBB1IPQ7Z5R6 666 aaPredicted RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MYCT1Q8N699 235 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 HLA-CQ95604 372 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 RPS6KC1Q96S38 1066 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ACO2Q99798 780 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TARS2Q9BW92 718 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SNTG2Q9NY99 539 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PUF60Q9UHX1 559 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 COG5Q9UP83 839 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 LZTS1Q9Y250 596 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ZMYM2Q9UBW7 1377 aa24.53■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PDCD11Q14690 1871 aaKnown RBP24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 CARNS1A5YM72 827 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 H0YCG3 227 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 K7ENM7 598 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 GALTP07902 379 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TFF2Q03403 129 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 SV2BQ7L1I2 683 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 DYMQ7RTS9 669 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TMEM173Q86WV6 379 aaPredicted RBP24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MICAL1Q8TDZ2 1067 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ATXN2LQ8WWM7 1075 aaKnown RBP24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 PPP2R3CQ969Q6 453 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 TMEM169Q96HH4 297 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 ENTPD7Q9NQZ7 604 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 MIOSQ9NXC5 875 aa24.52■■□□□ 1.52
PTCHD3P2-201ENST00000424937 RECQL4O94761 1208 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ERVFC1P60507 584 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 HYAL1Q12794 435 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PLPP4Q5VZY2 271 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 SHC4Q6S5L8 630 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 HAUS6Q7Z4H7 955 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ADGRD2Q7Z7M1 963 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TMEM175Q9BSA9 504 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CDT1Q9H211 546 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 UBE2ZQ9H832 354 aaPredicted RBP24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 GDAQ9Y2T3 454 aa24.51■■□□□ 1.51
PTCHD3P2-201ENST00000424937 MYMKA6NI61 221 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TRAK2O60296 914 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 MRPS5P82675 430 aaKnown RBP24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 AXDND1Q5T1B0 1012 aaPredicted RBP24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 EP400NLQ6ZTU2 488 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ZBTB33Q86T24 672 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 BCL7CQ8WUZ0 217 aaPredicted RBP24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 DDX12PQ92771 950 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 IGSF21Q96ID5 467 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CHAMP1Q96JM3 812 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TCF25Q9BQ70 676 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ANKFY1Q9P2R3 1169 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PCDHA7Q9UN72 937 aa24.5■■□□□ 1.51
PTCHD3P2-201ENST00000424937 FSCN2O14926 492 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 HARSP12081 509 aaKnown RBP24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 GRIK3Q13003 919 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 MPZL3Q6UWV2 235 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 FAM178BQ8IXR5 827 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 COLGALT2Q8IYK4 626 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CEP120Q8N960 986 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 GSTCDQ8NEC7 633 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 DHX58Q96C10 678 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 BICD1Q96G01 975 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TCHPQ9BT92 498 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 IGFLR1Q9H665 355 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PTPRHQ9HD43 1115 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CLDND1Q9NY35 253 aa24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PRG3Q9Y2Y8 225 aaPredicted RBP24.49■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PROZP22891 400 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 GTF2F1P35269 517 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 OR1G1P47890 313 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 NRIP1P48552 1158 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 KRT85P78386 507 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 DSC1Q08554 894 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 AAK1Q2M2I8 961 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PDE12Q6L8Q7 609 aaKnown RBP24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TMC7Q7Z402 723 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 RBM23Q86U06 439 aaKnown RBP24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 SFR1Q86XK3 245 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PABPC5Q96DU9 382 aaKnown RBP24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ASB2Q96Q27 587 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 RCOR1Q9UKL0 485 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 FAN1Q9Y2M0 1017 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ATP6V1DQ9Y5K8 247 aa24.48■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ABLIM1O14639 778 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 NRP1O14786 923 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ALDH2P05091 517 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 MCF2P10911 925 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 KCNA5P22460 613 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 NMT1P30419 496 aaKnown RBP24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CA8P35219 290 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms