RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 CDT1Q9H211 546 aa22.56■■□□□ 1.2
PMS1-211ENST00000424766 RNF19AQ9NV58 838 aa22.56■■□□□ 1.2
PMS1-211ENST00000424766 STYXL1Q9Y6J8 313 aa22.56■■□□□ 1.2
PMS1-211ENST00000424766 TRIOBPQ9H2D6 2365 aa22.56■■□□□ 1.2
PMS1-211ENST00000424766 ANKRD63C9JTQ0 380 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 MBD3O95983 291 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 HABP4Q5JVS0 413 aaKnown RBP22.55■■□□□ 1.2
PMS1-211ENST00000424766 SLC39A4Q6P5W5 647 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 ZBTB33Q86T24 672 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 KIAA0895Q8NCT3 520 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 GPT2Q8TD30 523 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 LPPQ93052 612 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 TMEM117Q9H0C3 514 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 CLSTN2Q9H4D0 955 aa22.55■■□□□ 1.2
PMS1-211ENST00000424766 RC3H2Q9HBD1 1191 aaKnown RBP22.55■■□□□ 1.2
PMS1-211ENST00000424766 KIF20AO95235 890 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 HOXD13P35453 343 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 MATR3P43243 847 aaKnown RBP eCLIP22.54■■□□□ 1.2
PMS1-211ENST00000424766 SNRPFP62306 86 aaKnown RBP22.54■■□□□ 1.2
PMS1-211ENST00000424766 NOLC1Q14978 699 aaKnown RBP eCLIP22.54■■□□□ 1.2
PMS1-211ENST00000424766 CAMK4Q16566 473 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 SP7Q8TDD2 431 aaPredicted RBP22.54■■□□□ 1.2
PMS1-211ENST00000424766 ERCC4Q92889 916 aaPredicted RBP22.54■■□□□ 1.2
PMS1-211ENST00000424766 HAPLN2Q9GZV7 340 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 RNF39Q9H2S5 420 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 NXF3Q9H4D5 531 aaKnown RBP22.54■■□□□ 1.2
PMS1-211ENST00000424766 GIT1Q9Y2X7 761 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 HES2Q9Y543 173 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 TRIP11Q15643 1979 aa22.54■■□□□ 1.2
PMS1-211ENST00000424766 CITO14578 2027 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 ZMYM2Q9UBW7 1377 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 A0A0B4J269 797 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 MEIS3P2A8K0S8 358 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 OFD1O75665 1012 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 FGFR1P11362 822 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 PBX2P40425 430 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 GRM5P41594 1212 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 KYAT1Q16773 422 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 KNOP1Q1ED39 458 aaKnown RBP22.53■■□□□ 1.2
PMS1-211ENST00000424766 CLLU1OSQ5K130 101 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 ZNF658Q5TYW1 1059 aaPredicted RBP22.53■■□□□ 1.2
PMS1-211ENST00000424766 GLB1LQ6UWU2 654 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 CMTR2Q8IYT2 770 aaKnown RBP22.53■■□□□ 1.2
PMS1-211ENST00000424766 ABI1Q8IZP0 508 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 CASD1Q96PB1 797 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 GBP3Q9H0R5 595 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 RSAD1Q9HA92 442 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 KIAA1468Q9P260 1216 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 ANKFY1Q9P2R3 1169 aa22.53■■□□□ 1.2
PMS1-211ENST00000424766 OGTO15294 1046 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 MYOGP15173 224 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 PTMSP20962 102 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 GARTP22102 1010 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 GUF1Q8N442 669 aaKnown RBP22.52■■□□□ 1.2
PMS1-211ENST00000424766 HELQQ8TDG4 1101 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 CCDC94Q9BW85 323 aaPredicted RBP22.52■■□□□ 1.2
PMS1-211ENST00000424766 NUP62CLQ9H1M0 184 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 IKZF4Q9H2S9 585 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 SNTG2Q9NY99 539 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 CGNQ9P2M7 1197 aaKnown RBP22.52■■□□□ 1.2
PMS1-211ENST00000424766 PARP2Q9UGN5 583 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 YBX2Q9Y2T7 364 aaKnown RBP22.52■■□□□ 1.2
PMS1-211ENST00000424766 COL4A6Q14031 1691 aa22.52■■□□□ 1.2
PMS1-211ENST00000424766 TDRD15B5MCY1 1934 aaKnown RBP22.51■■□□□ 1.19
PMS1-211ENST00000424766 TBKBP1A7MCY6 615 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 INPPL1O15357 1258 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 AKAP5P24588 427 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 DNAJB2P25686 324 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 ADSSP30520 456 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 GATMP50440 423 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 BTG3Q14201 252 aaPredicted RBP22.51■■□□□ 1.19
PMS1-211ENST00000424766 COBLL1Q53SF7 1204 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 NOMO2Q5JPE7 1267 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 NELFCDQ8IXH7 590 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 THNSL1Q8IYQ7 743 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 POMGNT1Q8WZA1 660 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 ACAP3Q96P50 834 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 APOL6Q9BWW8 343 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 KANSL3Q9P2N6 904 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 MAN1B1Q9UKM7 699 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 GDAQ9Y2T3 454 aa22.51■■□□□ 1.19
PMS1-211ENST00000424766 TISP43B9A030 160 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 KIAA0391O15091 583 aaKnown RBP22.5■■□□□ 1.19
PMS1-211ENST00000424766 TGFB1I1O43294 461 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 HS2ST1Q7LGA3 356 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 FIBCD1Q8N539 461 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 CEP120Q8N960 986 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 MSTO1Q9BUK6 570 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 MRPL9Q9BYD2 267 aaKnown RBP22.5■■□□□ 1.19
PMS1-211ENST00000424766 NKX2-4Q9H2Z4 354 aa22.5■■□□□ 1.19
PMS1-211ENST00000424766 AGO2Q9UKV8 859 aaKnown RBP22.5■■□□□ 1.19
PMS1-211ENST00000424766 LCHNA4D1U4 455 aa22.49■■□□□ 1.19
PMS1-211ENST00000424766 ARL5CA6NH57 179 aa22.49■■□□□ 1.19
PMS1-211ENST00000424766 RECQL4O94761 1208 aa22.49■■□□□ 1.19
PMS1-211ENST00000424766 LDHAP00338 332 aaKnown RBP22.49■■□□□ 1.19
PMS1-211ENST00000424766 CA3P07451 260 aa22.49■■□□□ 1.19
PMS1-211ENST00000424766 CLTAP09496 248 aa22.49■■□□□ 1.19
PMS1-211ENST00000424766 HARSP12081 509 aaKnown RBP22.49■■□□□ 1.19
PMS1-211ENST00000424766 YARSP54577 528 aaKnown RBP22.49■■□□□ 1.19
PMS1-211ENST00000424766 POU5F1Q01860 360 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms