RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 B4GALT5O43286 388 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 ITGA4P13612 1032 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GARTP22102 1010 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 TIE1P35590 1138 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GRM5P41594 1212 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 MYBPC2Q14324 1141 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GLB1LQ6UWU2 654 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 HS2ST1Q7LGA3 356 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 CD302Q8IX05 232 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GRAMD1CQ8IYS0 662 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 SYCP3Q8IZU3 236 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 ZNF689Q96CS4 500 aaPredicted RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 SAMD11Q96NU1 681 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 CCDC94Q9BW85 323 aaPredicted RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 MRPL9Q9BYD2 267 aaKnown RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 TMEM117Q9H0C3 514 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 GBP3Q9H0R5 595 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 CLSTN2Q9H4D0 955 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 TOPORSQ9NS56 1045 aaPredicted RBP11.15□□□□□ -0.62
NCSTN-204ENST00000424645 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 RWDD3Q9Y3V2 267 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 IPPQ9Y573 584 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
NCSTN-204ENST00000424645 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 A0A0B4J269 797 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 PDXKO00764 312 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 TLL1O43897 1013 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 YARSP54577 528 aaKnown RBP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 DEFB103AP81534 67 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 STK4Q13043 487 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 PNOCQ13519 176 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 STIM1Q13586 685 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 NOLC1Q14978 699 aaKnown RBP eCLIP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 KNOP1Q1ED39 458 aaKnown RBP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 ZC2HC1CQ53FD0 456 aaPredicted RBP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 SCFD1Q8WVM8 642 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 SYAP1Q96A49 352 aaPredicted RBP11.14□□□□□ -0.63
NCSTN-204ENST00000424645 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 NUP62CLQ9H1M0 184 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 MYH11P35749 1972 aa11.14□□□□□ -0.63
NCSTN-204ENST00000424645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 ABLIM1O14639 778 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 OGTO15294 1046 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 UPP2O95045 317 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 NPTXRO95502 500 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 CLTAP09496 248 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 MYBP10242 640 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 CASP1P29466 404 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 NFIL3Q16649 462 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 CT47A1Q5JQC4 288 aaPredicted RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 SLC9A9Q8IVB4 645 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 SMG8Q8ND04 991 aaKnown RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 TET1Q8NFU7 2136 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 ACAP3Q96P50 834 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 CDT1Q9H211 546 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 RSAD1Q9HA92 442 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 RC3H2Q9HBD1 1191 aaKnown RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 AAASQ9NRG9 546 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
NCSTN-204ENST00000424645 STK39Q9UEW8 545 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 TRAF3IP3Q9Y228 551 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 TTC3P53804 2025 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
NCSTN-204ENST00000424645 CALUO43852 315 aaPredicted RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 OFD1O75665 1012 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 EDN1P05305 212 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 RB1P06400 928 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 ADRB2P07550 413 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 RPL13P26373 211 aaKnown RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 MATR3P43243 847 aaKnown RBP eCLIP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 CASP5P51878 434 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 BTG3Q14201 252 aaPredicted RBP11.12□□□□□ -0.63
NCSTN-204ENST00000424645 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 NOMO2Q5JPE7 1267 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 AGMOQ6ZNB7 445 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 NT5DC4Q86YG4 428 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 FIBCD1Q8N539 461 aa11.12□□□□□ -0.63
NCSTN-204ENST00000424645 KIAA0895Q8NCT3 520 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms