RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 UBE2Q1Q7Z7E8 422 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 LPPQ93052 612 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 NFKBIZQ9BYH8 718 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 KLK14Q9P0G3 267 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 SMTNL1A8MU46 457 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 CETN3O15182 167 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 LRRN2O75325 713 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 TOM1L1O75674 476 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 CLTBP09497 229 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-202ENST00000424478 SELPP16109 830 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 SFPQP23246 707 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRPF39-202ENST00000424478 PAK2Q13177 524 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 KRT31Q15323 416 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 CRELD2Q6UXH1 353 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-202ENST00000424478 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
PRPF39-202ENST00000424478 C7orf61Q8IZ16 206 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 AGPAT5Q9NUQ2 364 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 IFNKQ9P0W0 207 aa14.67□□□□□ -0.06
PRPF39-202ENST00000424478 UBE4BO95155 1302 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 A0A0B4J269 797 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 H0YCG3 227 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 MEFVO15553 781 aaPredicted RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 TCP11X2Q5H9J9 407 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 TMCO2Q7Z6W1 182 aaPredicted RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 FAM186BQ8IYM0 893 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 IFIH1Q9BYX4 1025 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 PTPRHQ9HD43 1115 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 SERPINC1P01008 464 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 CXCL8P10145 99 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 ACRP10323 421 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 DLATP10515 647 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 AFF1P51825 1210 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 APBA1Q02410 837 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 NOLC1Q14978 699 aaKnown RBP eCLIP14.66□□□□□ -0.065e-32■■■■■ 47.5
PRPF39-202ENST00000424478 SNRNP35Q16560 246 aaKnown RBP14.66□□□□□ -0.06
PRPF39-202ENST00000424478 MPZL3Q6UWV2 235 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 GPIHBP1Q8IV16 184 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 XXYLT1Q8NBI6 393 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 SLC17A8Q8NDX2 589 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 DBF4BQ8NFT6 615 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 DMAC2Q9NW81 257 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 SNTG2Q9NY99 539 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 TBX21Q9UL17 535 aa14.66□□□□□ -0.06
PRPF39-202ENST00000424478 A0A1B0GUA9 196 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 TEX33O43247 280 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 FANCCQ00597 558 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 HVCN1Q96D96 273 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 ZMYND8Q9ULU4 1186 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-202ENST00000424478 PTPRJQ12913 1337 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 FAM189A1O60320 539 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 CSF2RAP15509 400 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 POU5F1BQ06416 359 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 UBXN11Q5T124 520 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
PRPF39-202ENST00000424478 TNS4Q8IZW8 715 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 MROH7Q68CQ1 1323 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 PROZP22891 400 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 ZPBP2Q6X784 338 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 RTN4RL1Q86UN2 441 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-202ENST00000424478 ADAM2Q99965 735 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 CRACR2AQ9BSW2 395 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 TRIM6Q9C030 488 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-202ENST00000424478 XPO4Q9C0E2 1151 aaKnown RBP14.65□□□□□ -0.06
PRPF39-202ENST00000424478 ERVK-5Q9HDB9 667 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 INTS13Q9NVM9 706 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 CACNG4Q9UBN1 327 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 TNFSF13BQ9Y275 285 aa14.65□□□□□ -0.06
PRPF39-202ENST00000424478 PIGRP01833 764 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 PPP1R2P41236 205 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 KLK7P49862 253 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 BFSP2Q13515 415 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 RPAINQ86UA6 219 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 GPD1LQ8N335 351 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 LINC01599Q8WXQ3 324 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 TUBGCP2Q9BSJ2 902 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 FRMD4BQ9Y2L6 1034 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 CHD7Q9P2D1 2997 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 FAM187BQ17R55 369 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 NOTUMQ6P988 496 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 CAGE1Q8TC20 777 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 TRIM5Q9C035 493 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 THAP9Q9H5L6 903 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 MAGEC2Q9UBF1 373 aaPredicted RBP14.64□□□□□ -0.07
PRPF39-202ENST00000424478 KCNG1Q9UIX4 513 aa14.64□□□□□ -0.07
PRPF39-202ENST00000424478 CAVIN2O95810 425 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 STAG3L1P0CL83 205 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 RPL13P26373 211 aaKnown RBP14.63□□□□□ -0.07
PRPF39-202ENST00000424478 GUCY2FP51841 1108 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 MCL1Q07820 350 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 PRIMPOLQ96LW4 560 aa14.63□□□□□ -0.07
PRPF39-202ENST00000424478 ZFP42Q96MM3 310 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms