RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 LINC01553A4QN01 128 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 HARSP12081 509 aaKnown RBP27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 CLLU1OSQ5K130 101 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 SPOUT1Q5T280 376 aaKnown RBP27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 AGMOQ6ZNB7 445 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 URGCPQ8TCY9 931 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 MRPL9Q9BYD2 267 aaKnown RBP27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 PTPRHQ9HD43 1115 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 INPP5FQ9Y2H2 1132 aa27.82■■■□□ 2.04
TSPAN3-203ENST00000424443 MEIS3P2A8K0S8 358 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 PPP1R37O75864 691 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 PIGRP01833 764 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 MCF2P10911 925 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 CASP5P51878 434 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 TAP1Q03518 808 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 DPYDQ12882 1025 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 PSMD2Q13200 908 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 NOLC1Q14978 699 aaKnown RBP eCLIP27.81■■■□□ 2.044e-6■□□□□ 8.2
TSPAN3-203ENST00000424443 KMT5BQ4FZB7 885 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 ZBTB45Q96K62 511 aaPredicted RBP27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 CASD1Q96PB1 797 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 STRA6Q9BX79 667 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 CDT1Q9H211 546 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 RNF39Q9H2S5 420 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 TMEM206Q9H813 350 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 RNF19AQ9NV58 838 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 GIT1Q9Y2X7 761 aa27.81■■■□□ 2.04
TSPAN3-203ENST00000424443 KLRC4O43908 158 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 PRPF6O94906 941 aaKnown RBP27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 PROZP22891 400 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 AKAP5P24588 427 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 LRRC43Q8N309 656 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 TGS1Q96RS0 853 aaKnown RBP27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 CCDC94Q9BW85 323 aaPredicted RBP27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 SLC39A2Q9NP94 309 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 SNTG2Q9NY99 539 aa27.8■■■□□ 2.04
TSPAN3-203ENST00000424443 EIF3DO15371 548 aaKnown RBP eCLIP27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 OFD1O75665 1012 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 EHHADHQ08426 723 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 PNOCQ13519 176 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 NOMO2Q5JPE7 1267 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 SAMD11Q96NU1 681 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 FGFBP2Q9BYJ0 223 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 GDAQ9Y2T3 454 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 RWDD3Q9Y3V2 267 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 FNDC1Q4ZHG4 1894 aaPredicted RBP27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 COL4A6Q14031 1691 aa27.79■■■□□ 2.04
TSPAN3-203ENST00000424443 SMC2O95347 1197 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 RNASELQ05823 741 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 MCL1Q07820 350 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 SLFN12LQ6IEE8 588 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 THNSL1Q8IYQ7 743 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 RPS6KC1Q96S38 1066 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 KANSL3Q9P2N6 904 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 MTUS1Q9ULD2 1270 aa27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 MRPL42Q9Y6G3 142 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-203ENST00000424443 MLH1P40692 756 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 YARSP54577 528 aaKnown RBP27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 OSTNP61366 133 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 KCNA1Q09470 495 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 GLIS3Q8NEA6 775 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 FAM161BQ96MY7 647 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 CERS4Q9HA82 394 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 TYW1Q9NV66 732 aaKnown RBP27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 ARHGEF15O94989 841 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 GRM5P41594 1212 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 ELOA2Q8IYF1 753 aaPredicted RBP27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 ARNTL2Q8WYA1 636 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 GAD1Q99259 594 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 MSTO1Q9BUK6 570 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 TTYH1Q9H313 450 aaPredicted RBP27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 SEMA6BQ9H3T3 888 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 AAASQ9NRG9 546 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 RMND1Q9NWS8 449 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 KLK14Q9P0G3 267 aa27.77■■■□□ 2.04
TSPAN3-203ENST00000424443 UBE4BO95155 1302 aa27.76■■■□□ 2.04
TSPAN3-203ENST00000424443 ARL5CA6NH57 179 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 RECQL4O94761 1208 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 KCNB1Q14721 858 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 DEFB123Q8N688 67 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 ZNF507Q8TCN5 953 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 POMGNT1Q8WZA1 660 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 SMARCE1Q969G3 411 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 ACAP3Q96P50 834 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 FAM193BQ96PV7 902 aaPredicted RBP27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 TOPORSQ9NS56 1045 aaPredicted RBP27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 LMBRD1Q9NUN5 540 aa27.76■■■□□ 2.03
TSPAN3-203ENST00000424443 ANKRD63C9JTQ0 380 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 ABLIM1O14639 778 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 RHOBTB3O94955 611 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 CTNNB1P35222 781 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 ERVK-21P61565 698 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 KYAT1Q16773 422 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 EPM2AIP1Q7L775 607 aaPredicted RBP27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 TMEM192Q8IY95 271 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 CEP120Q8N960 986 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 CLP1Q92989 425 aaKnown RBP27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 C17orf80Q9BSJ5 609 aa27.75■■■□□ 2.03
TSPAN3-203ENST00000424443 POMCP01189 267 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 STK4Q13043 487 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms