RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OFD1O75665 1012 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 DDHD2O94830 711 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 C22orf31O95567 290 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 CHRNB1P11230 501 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 DARSP14868 501 aaKnown RBP7.15□□□□□ -1.26
SDCBP-203ENST00000424270 ATXN3P54252 364 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-203ENST00000424270 DSG1Q02413 1049 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 PTGDRQ13258 359 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 USP41Q3LFD5 358 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 TANGO2Q6ICL3 276 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 SWSAP1Q6NVH7 229 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 CEP57Q86XR8 500 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 TBC1D10CQ8IV04 446 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 SLC7A14Q8TBB6 771 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 MDM1Q8TC05 714 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 ELSPBP1Q96BH3 223 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 COLEC11Q9BWP8 271 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 RSAD1Q9HA92 442 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 RXFP1Q9HBX9 757 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 JADE2Q9NQC1 790 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 CHST12Q9NRB3 414 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 FAM105AQ9NUU6 356 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 HCFC1R1Q9NWW0 138 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 GDE1Q9NZC3 331 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 SEC63Q9UGP8 760 aaKnown RBP7.15□□□□□ -1.26
SDCBP-203ENST00000424270 KCNH3Q9ULD8 1083 aa7.15□□□□□ -1.26
SDCBP-203ENST00000424270 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.27
SDCBP-203ENST00000424270 SLC38A8A6NNN8 435 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 B4E1Z4 1266 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 TK2O00142 265 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 FOXP2O15409 715 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 B4GALT3O60512 393 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 PAPSS2O95340 614 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-203ENST00000424270 PSMC3P17980 439 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF76P36508 570 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 KCNC4Q03721 635 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 GAS6Q14393 721 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 ALX1Q15699 326 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 GREB1Q4ZG55 1949 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 C1orf228Q6PIY5 440 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 CATSPER4Q7RTX7 472 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 CYP2U1Q7Z449 544 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 PLEKHM2Q8IWE5 1019 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 HDDC3Q8N4P3 179 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 ENAHQ8N8S7 591 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-203ENST00000424270 TTC8Q8TAM2 541 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF334Q9HCZ1 680 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-203ENST00000424270 KCNH7Q9NS40 1196 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.14□□□□□ -1.27
SDCBP-203ENST00000424270 SAMM50Q9Y512 469 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 PCDHB2Q9Y5E7 798 aa7.14□□□□□ -1.27
SDCBP-203ENST00000424270 IGSF10Q6WRI0 2623 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 RIOK3O14730 519 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 EXTL3O43909 919 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 TADA2AO75478 443 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 AKAP3O75969 853 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 HOXC13P31276 330 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 ABCG1P45844 678 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 GPC3P51654 580 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 LMAN2Q12907 356 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 KARSQ15046 597 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 ZNF423Q2M1K9 1284 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PLK5Q496M5 336 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 AXDND1Q5T1B0 1012 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PRSS55Q6UWB4 352 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 CCDC60Q8IWA6 550 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PDCD7Q8N8D1 485 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PIP4K2CQ8TBX8 421 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 RRP36Q96EU6 259 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 CRELD1Q96HD1 420 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 GTPBP2Q9BX10 602 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 NUSAP1Q9BXS6 441 aaKnown RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 INO80BQ9C086 356 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-203ENST00000424270 SLITRK6Q9H5Y7 841 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PSTPIP2Q9H939 334 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 MARCH5Q9NX47 278 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 FNIP2Q9P278 1114 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 MAD2L2Q9UI95 211 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 PCDHB9Q9Y5E1 797 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 UBIAD1Q9Y5Z9 338 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 AKAP13Q12802 2813 aa7.13□□□□□ -1.27
SDCBP-203ENST00000424270 NFASCO94856 1347 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 CNTNAP2Q9UHC6 1331 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 BCLAF3A2AJT9 711 aaKnown RBP7.12□□□□□ -1.27
SDCBP-203ENST00000424270 CAPN8A6NHC0 703 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 PATE3B3GLJ2 98 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 PYCARD-AS1I3L0S3 204 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 DCLK1O15075 740 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 ATG13O75143 517 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 C1QL1O75973 258 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 C1RP00736 705 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 LRG1P02750 347 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 RHOP08100 348 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 ITGA4P13612 1032 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 CEBPBP17676 345 aa7.12□□□□□ -1.27
SDCBP-203ENST00000424270 HOXA6P31267 233 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms