RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 S1PR5Q9H228 398 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 ARHGAP28Q9P2N2 729 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 CACNG4Q9UBN1 327 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 CDH22Q9UJ99 828 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 PRG3Q9Y2Y8 225 aaPredicted RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 USP15Q9Y4E8 981 aaPredicted RBP17.07■□□□□ 0.32
SPC24-201ENST00000423327 HCFC2Q9Y5Z7 792 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 TRIP11Q15643 1979 aa17.07■□□□□ 0.32
SPC24-201ENST00000423327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
SPC24-201ENST00000423327 PTGESO14684 152 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 N4BP3O15049 544 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 GUCY2CP25092 1073 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 PEX3P56589 373 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 ANKRD54Q6NXT1 300 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 SYT2Q8N9I0 419 aaPredicted RBP17.06■□□□□ 0.32
SPC24-201ENST00000423327 SUSD6Q92537 303 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 IFT74Q96LB3 600 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 C11orf16Q9NQ32 467 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 SNTG2Q9NY99 539 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 PARP2Q9UGN5 583 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 FAN1Q9Y2M0 1017 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
SPC24-201ENST00000423327 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 CARNS1A5YM72 827 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 LILRB3O75022 631 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 RECQL4O94761 1208 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 CXCL14O95715 111 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 OR1G1P47890 313 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
SPC24-201ENST00000423327 RAD51AP2Q09MP3 1159 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 NAB2Q15742 525 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 ARSHQ5FYA8 562 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 TAS1R1Q7RTX1 841 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 CABP7Q86V35 215 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 AK8Q96MA6 479 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
SPC24-201ENST00000423327 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 PLXNA3P51805 1871 aa17.05■□□□□ 0.32
SPC24-201ENST00000423327 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 CCDC169A6NNP5 214 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 ABLIM1O14639 778 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 ALDH2P05091 517 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPC24-201ENST00000423327 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 PDCP20941 246 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 SSTR3P32745 418 aaPredicted RBP17.04■□□□□ 0.32
SPC24-201ENST00000423327 CA8P35219 290 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 EFNA5P52803 228 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 GRIK3Q13003 919 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 ATF7IP2Q5U623 682 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 CEP120Q8N960 986 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 RABGGTAQ92696 567 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 APOL5Q9BWW9 433 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 PTPRHQ9HD43 1115 aa17.04■□□□□ 0.32
SPC24-201ENST00000423327 PI4K2BG5E9Z4 385 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 SLC16A4O15374 487 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 BMP15O95972 392 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 SOD2P04179 222 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 EPCAMP16422 314 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
SPC24-201ENST00000423327 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
SPC24-201ENST00000423327 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 HACE1Q8IYU2 909 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 KCTD17Q8N5Z5 321 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 ACO2Q99798 780 aaKnown RBP17.03■□□□□ 0.32
SPC24-201ENST00000423327 CDT1Q9H211 546 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 TNFSF13BQ9Y275 285 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 VWA8A3KMH1 1905 aa17.03■□□□□ 0.32
SPC24-201ENST00000423327 K7ERI5 159 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 MEFVO15553 781 aaPredicted RBP17.02■□□□□ 0.32
SPC24-201ENST00000423327 CNPP09543 421 aaKnown RBP17.02■□□□□ 0.32
SPC24-201ENST00000423327 PLCG1P19174 1290 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 PROZP22891 400 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.32
SPC24-201ENST00000423327 TMEM132AQ24JP5 1023 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 DCAF4L1Q3SXM0 396 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 KANK3Q6NY19 840 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 CASP10Q92851 521 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 SNX21Q969T3 373 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 CDK5RAP3Q96JB5 506 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 B3GALT6Q96L58 329 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 KLHL5Q96PQ7 755 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 RPS6KC1Q96S38 1066 aa17.02■□□□□ 0.32
SPC24-201ENST00000423327 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms