RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 TISP43B9A030 160 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ANKRD63C9JTQ0 380 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 TLL1O43897 1013 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ZNF623O75123 536 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 TOM1L1O75674 476 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 SMC2O95347 1197 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 EOMESO95936 686 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 FGFR1P11362 822 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ATF7P17544 494 aaPredicted RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ABCD1P33897 745 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 HOXD13P35453 343 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 LIG4P49917 911 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 RAB27AP51159 221 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 PSMD2Q13200 908 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ALCAMQ13740 583 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ZPBP2Q6X784 338 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 STXBP4Q6ZWJ1 553 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 EPM2AIP1Q7L775 607 aaPredicted RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 MRPL10Q7Z7H8 261 aaKnown RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 MAP4K3Q8IVH8 894 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 SYCP3Q8IZU3 236 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 KIAA0895Q8NCT3 520 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 SMG8Q8ND04 991 aaKnown RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ZNF507Q8TCN5 953 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 SCFD1Q8WVM8 642 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 SMARCE1Q969G3 411 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 YME1L1Q96TA2 773 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 RAD9AQ99638 391 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ADPGKQ9BRR6 497 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 APOL6Q9BWW8 343 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 PBX4Q9BYU1 374 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 NXF3Q9H4D5 531 aaKnown RBP10.16□□□□□ -0.78
PDGFC-202ENST00000422544 ANKFY1Q9P2R3 1169 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 IPPQ9Y573 584 aa10.16□□□□□ -0.78
PDGFC-202ENST00000422544 MUC6Q6W4X9 2439 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 LCHNA4D1U4 455 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 ABLIM1O14639 778 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 HNRNPDLO14979 420 aaKnown RBP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 CLDN3O15551 220 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 DGKIO75912 1065 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 RHOBTB3O94955 611 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 PIGRP01833 764 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 ITGA4P13612 1032 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 PROZP22891 400 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 AKAP5P24588 427 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 SMAD3P84022 425 aaKnown RBP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 KCNB1Q14721 858 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 DCAF4L1Q3SXM0 396 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 ZNF568Q3ZCX4 644 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 PAN2Q504Q3 1202 aaKnown RBP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 ISM2Q6H9L7 571 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 SLC39A4Q6P5W5 647 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 MPZL3Q6UWV2 235 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 AGMOQ6ZNB7 445 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 NELFCDQ8IXH7 590 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 SPATA20Q8TB22 786 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 PGBD4Q96DM1 585 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 GSDMAQ96QA5 445 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 HAPLN2Q9GZV7 340 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 CDT1Q9H211 546 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 CLSTN2Q9H4D0 955 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 TMEM206Q9H813 350 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 RNF19AQ9NV58 838 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 SNTG2Q9NY99 539 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 MSRAQ9UJ68 235 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 EXOC7Q9UPT5 735 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 GDAQ9Y2T3 454 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 YBX2Q9Y2T7 364 aaKnown RBP10.15□□□□□ -0.78
PDGFC-202ENST00000422544 INSL6Q9Y581 213 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 PCDHA11Q9Y5I1 949 aa10.15□□□□□ -0.78
PDGFC-202ENST00000422544 TBKBP1A7MCY6 615 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 EIF3DO15371 548 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 OFD1O75665 1012 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 MCF2P10911 925 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 OSTNP61366 133 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 HTRA4P83105 476 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 MCL1Q07820 350 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 SEZ6Q53EL9 994 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 CLLU1OSQ5K130 101 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 SLFN12LQ6IEE8 588 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 SMYD4Q8IYR2 804 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 HACE1Q8IYU2 909 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 ABI1Q8IZP0 508 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 CEP120Q8N960 986 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
PDGFC-202ENST00000422544 CASD1Q96PB1 797 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 NKX2-4Q9H2Z4 354 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 RMND1Q9NWS8 449 aa10.14□□□□□ -0.79
PDGFC-202ENST00000422544 KLK14Q9P0G3 267 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms