RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 RALYLQ86SE5 291 aaKnown RBP6.39□□□□□ -1.39
HDAC8-212ENST00000421523 WDR5BQ86VZ2 330 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 SGMS1Q86VZ5 419 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 CMTR1Q8N1G2 835 aaKnown RBP6.39□□□□□ -1.39
HDAC8-212ENST00000421523 TMTC2Q8N394 836 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 SPEM1Q8N4L4 309 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 ITFG1Q8TB96 612 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PIP4K2CQ8TBX8 421 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 ING5Q8WYH8 240 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 FAM3CQ92520 227 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 TMEM87BQ96K49 555 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PCYT2Q99447 389 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 RHOBTB2Q9BYZ6 727 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PRKD2Q9BZL6 878 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PLA2G2FQ9BZM2 168 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 SLC32A1Q9H598 525 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 POLIQ9UNA4 740 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 UBIAD1Q9Y5Z9 338 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PIAS3Q9Y6X2 628 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 BOD1L1Q8NFC6 3051 aa6.39□□□□□ -1.39
HDAC8-212ENST00000421523 PATE3B3GLJ2 98 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 SLC27A2O14975 620 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 MAFGO15525 162 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 TGM5O43548 720 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 PRC1O43663 620 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 B4GALT3O60512 393 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 GALTP07902 379 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 CHRNB1P11230 501 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
HDAC8-212ENST00000421523 KIF5BP33176 963 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 MCM5P33992 734 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 RDXP35241 583 aaKnown RBP6.38□□□□□ -1.39
HDAC8-212ENST00000421523 MAPK8P45983 427 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 GNAQP50148 359 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 CREB3L3Q68CJ9 461 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 NME8Q8N427 588 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 FANCBQ8NB91 859 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 LPPQ93052 612 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 GPRASP2Q96D09 838 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 RRP36Q96EU6 259 aaKnown RBP6.38□□□□□ -1.39
HDAC8-212ENST00000421523 PHF12Q96QT6 1004 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 RPS6KC1Q96S38 1066 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 SMARCAD1Q9H4L7 1026 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 NRDE2Q9H7Z3 1164 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 TBC1D13Q9NVG8 400 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 ZDHHC7Q9NXF8 308 aa6.38□□□□□ -1.39
HDAC8-212ENST00000421523 PTPRQQ9UMZ3 2332 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 MYH9P35579 1960 aaKnown RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 FAM221BA6H8Z2 402 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 H0Y626 953 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CDX4O14627 284 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CCL16O15467 120 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 GAS2O43903 313 aaKnown RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 ATG7O95352 703 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 TRIM16O95361 564 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 VTNP04004 478 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CALM1P0DP23 149 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CALM2P0DP24 149 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CALM3P0DP25 149 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 RXRAP19793 462 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CCNE1P24864 410 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CLK2P49760 499 aaKnown RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 FAM193AP78312 1265 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 IRX6P78412 446 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 PTGDRQ13258 359 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 LRRC32Q14392 662 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 TAS1R1Q7RTX1 841 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 RAB44Q7Z6P3 723 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 TEX2Q8IWB9 1127 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 NPAS3Q8IXF0 933 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 KIAA0319LQ8IZA0 1049 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 ZNF579Q8NAF0 562 aaKnown RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 GIMAP8Q8ND71 665 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CTCFLQ8NI51 663 aaPredicted RBP6.37□□□□□ -1.39
HDAC8-212ENST00000421523 CRYGNQ8WXF5 182 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 PIBF1Q8WXW3 757 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 SEPT1Q8WYJ6 367 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 DNASE1L2Q92874 299 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 B3GALT6Q96L58 329 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 ARID3AQ99856 593 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 PSTPIP2Q9H939 334 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 BRPF3Q9ULD4 1205 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 PCDHA6Q9UN73 950 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 PCDHA8Q9Y5H6 950 aa6.37□□□□□ -1.39
HDAC8-212ENST00000421523 COL4A2P08572 1712 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 DOPEY2Q9Y3R5 2298 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 CNTNAP5Q8WYK1 1306 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 IGKV6D-21A0A0A0MT36 114 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 hCG_1642624A0A1W2PR95 340 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 PCNX2A6NKB5 2137 aa6.36□□□□□ -1.39
HDAC8-212ENST00000421523 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms