RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
TRIM39-206ENST00000420746 PIN4Q9Y237 131 aaKnown RBP10.19□□□□□ -0.78
TRIM39-206ENST00000420746 PRG3Q9Y2Y8 225 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-206ENST00000420746 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
TRIM39-206ENST00000420746 PIAS3Q9Y6X2 628 aa10.19□□□□□ -0.78
TRIM39-206ENST00000420746 COL4A2P08572 1712 aa10.19□□□□□ -0.78
TRIM39-206ENST00000420746 H0Y626 953 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 HYAL3O43820 417 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 NR1I2O75469 434 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 TRIM16O95361 564 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 C8AP07357 584 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 DSC1Q08554 894 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 UVSSAQ2YD98 709 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 LONRF3Q496Y0 759 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 DGKKQ5KSL6 1271 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 TANGO2Q6ICL3 276 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 SWSAP1Q6NVH7 229 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 NIPA1Q7RTP0 329 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 KBTBD6Q86V97 674 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 LRRC71Q8N4P6 559 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 RRP36Q96EU6 259 aaKnown RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 TRMT61BQ9BVS5 477 aaKnown RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 UBN1Q9NPG3 1134 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 SEC63Q9UGP8 760 aaKnown RBP10.18□□□□□ -0.78
TRIM39-206ENST00000420746 KLK13Q9UKR3 277 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 PCDHB2Q9Y5E7 798 aa10.18□□□□□ -0.78
TRIM39-206ENST00000420746 SALL3Q9BXA9 1300 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 LNP1A1A4G5 178 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 TK2O00142 265 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 MEIS1O00470 390 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 CCL16O15467 120 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 FCARP24071 287 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 OR1G1P47890 313 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 AFF1P51825 1210 aaKnown RBP10.17□□□□□ -0.78
TRIM39-206ENST00000420746 IMMTQ16891 758 aaKnown RBP10.17□□□□□ -0.78
TRIM39-206ENST00000420746 TCEAL6Q6IPX3 200 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 ZNF410Q86VK4 478 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-206ENST00000420746 SYNPOQ8N3V7 929 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 DEPDC1BQ8WUY9 529 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 TCEAL3Q969E4 200 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 SMOC1Q9H4F8 434 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 ZFP14Q9HCL3 533 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 TMEM9BQ9NQ34 198 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 DNMT3BQ9UBC3 853 aaKnown RBP10.17□□□□□ -0.78
TRIM39-206ENST00000420746 MRPS23Q9Y3D9 190 aaKnown RBP10.17□□□□□ -0.78
TRIM39-206ENST00000420746 PCDHB15Q9Y5E8 787 aa10.17□□□□□ -0.78
TRIM39-206ENST00000420746 MICAL2O94851 1124 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 POMCP01189 267 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 CCDC192P0DO97 292 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 PSMC3P17980 439 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 RDXP35241 583 aaKnown RBP10.16□□□□□ -0.78
TRIM39-206ENST00000420746 FGD1P98174 961 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 NMIQ13287 307 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-206ENST00000420746 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-206ENST00000420746 KIAA1211LQ6NV74 962 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 CNNM3Q8NE01 707 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 OTUD7AQ8TE49 926 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-206ENST00000420746 ZNF668Q96K58 619 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-206ENST00000420746 MAP3K14Q99558 947 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 COLEC11Q9BWP8 271 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 GPR62Q9BZJ7 368 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 SLC32A1Q9H598 525 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 AGPAT5Q9NUQ2 364 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 POLIQ9UNA4 740 aa10.16□□□□□ -0.78
TRIM39-206ENST00000420746 ARNTLO00327 626 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 DHX15O43143 795 aaKnown RBP10.15□□□□□ -0.78
TRIM39-206ENST00000420746 ZNF862O60290 1169 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
TRIM39-206ENST00000420746 PSAPP07602 524 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 RPL17P18621 184 aaKnown RBP10.15□□□□□ -0.78
TRIM39-206ENST00000420746 CCNE1P24864 410 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 UBE2SQ16763 222 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 PLK5Q496M5 336 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 Q6ZS52 159 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 SLC7A14Q8TBB6 771 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 ING5Q8WYH8 240 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 MCRS1Q96EZ8 462 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 C8orf33Q9H7E9 229 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-206ENST00000420746 ADAM28Q9UKQ2 775 aa10.15□□□□□ -0.78
TRIM39-206ENST00000420746 BAZ2BQ9UIF8 2168 aaKnown RBP10.15□□□□□ -0.79
TRIM39-206ENST00000420746 WDR81Q562E7 1941 aa10.15□□□□□ -0.79
TRIM39-206ENST00000420746 SPAG17Q6Q759 2223 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 A0A087WZ62 844 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 BCLAF3A2AJT9 711 aaKnown RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 DDX39AO00148 427 aaKnown RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 CDX4O14627 284 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 RHOBTB1O94844 696 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 CAVIN2O95810 425 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 FOSP01100 380 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-206ENST00000420746 OATP04181 439 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 RHOP08100 348 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 PLA2G2AP14555 144 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 GDI1P31150 447 aa10.14□□□□□ -0.79
TRIM39-206ENST00000420746 SCAPQ12770 1279 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms