RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ERLIN1O75477 346 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 KIF4AO95239 1232 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 KRT5P13647 590 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 PRLRP16471 622 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CHRNB2P17787 502 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 TNNI1P19237 187 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 EPHX2P34913 555 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 STAT5BP51692 787 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CYP24A1Q07973 514 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CETN1Q12798 172 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 TERF2Q15554 542 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 MAP1SQ66K74 1059 aaPredicted RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 HDXQ7Z353 690 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 ERO1BQ86YB8 467 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
SNCA-206ENST00000420646 SLC7A3Q8WY07 619 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 CDHR1Q96JP9 859 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 PNMA2Q9UL42 364 aa9.51□□□□□ -0.89
SNCA-206ENST00000420646 NFASCO94856 1347 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 ERICH4A6NGS2 130 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 K7ERI5 159 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 MARCKSL1P49006 195 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 CARSP49589 748 aaKnown RBP9.5□□□□□ -0.89
SNCA-206ENST00000420646 OSTNP61366 133 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 GUCY2DQ02846 1103 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 MOGSQ13724 837 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 ALCAMQ13740 583 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 DAB2IPQ5VWQ8 1189 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 KRT39Q6A163 491 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 DDX42Q86XP3 938 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNCA-206ENST00000420646 ANKRD13AQ8IZ07 590 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 MCPH1Q8NEM0 835 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 PRPF31Q8WWY3 499 aaKnown RBP9.5□□□□□ -0.89
SNCA-206ENST00000420646 IWS1Q96ST2 819 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 DDX47Q9H0S4 455 aaKnown RBP9.5□□□□□ -0.89
SNCA-206ENST00000420646 RAB20Q9NX57 234 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 PAPPA2Q9BXP8 1791 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 CFHP08603 1231 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 FAM153BP0C7A2 387 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 TNFSF9P41273 254 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 IGBP1P78318 339 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 FAM153CQ494X1 144 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 C8orf74Q6P047 294 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 C12orf56Q8IXR9 622 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 DNERQ8NFT8 737 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 RDM1Q8NG50 284 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 DEPTORQ8TB45 409 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 EPS8L1Q8TE68 723 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 CTNNBL1Q8WYA6 563 aaPredicted RBP9.5□□□□□ -0.89
SNCA-206ENST00000420646 SELENOOQ9BVL4 669 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 EPB41L5Q9HCM4 733 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 FAM153AQ9UHL3 310 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 MYH9P35579 1960 aaKnown RBP9.5□□□□□ -0.89
SNCA-206ENST00000420646 SBF1O95248 1867 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 LAMA3Q16787 3333 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 WDR81Q562E7 1941 aa9.5□□□□□ -0.89
SNCA-206ENST00000420646 PPATQ06203 517 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 BIRC3Q13489 604 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 CAPSQ13938 189 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 MYBPC2Q14324 1141 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 KIF22Q14807 665 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 CRELD2Q6UXH1 353 aaPredicted RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 SND1Q7KZF4 910 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNCA-206ENST00000420646 NT5DC3Q86UY8 548 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 MMGT1Q8N4V1 131 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 FBXL13Q8NEE6 735 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 OR5B17Q8NGF7 314 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TAF4BQ92750 862 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 CEP89Q96ST8 783 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 UBXN6Q9BZV1 441 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 DHX33Q9H6R0 707 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 VPS18Q9P253 973 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 NFU1Q9UMS0 254 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 ATG7O95352 703 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 NF2P35240 595 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 GUCY2FP51841 1108 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 BRDTQ58F21 947 aaPredicted RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 DCAF12L1Q5VU92 463 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 ZNF771Q7L3S4 317 aaPredicted RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 KRT35Q92764 455 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 MFSD14AQ96MC6 490 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 TRIM7Q9C029 511 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 CTTNBP2NLQ9P2B4 639 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 AGO2Q9UKV8 859 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 FAN1Q9Y2M0 1017 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 MCM3APO60318 1980 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 UMODL1Q5DID0 1318 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
SNCA-206ENST00000420646 RAD51CO43502 376 aa9.49□□□□□ -0.89
SNCA-206ENST00000420646 HEXIM1O94992 359 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms