RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 FAN1Q9Y2M0 1017 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 GIT1Q9Y2X7 761 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 KMT2EQ8IZD2 1858 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 E9PMD0 336 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 ALDH2P05091 517 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 GJB2P29033 226 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 CDC25AP30304 524 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 PRPHP41219 470 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 NAMPTP43490 491 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-206ENST00000420121 EEF1DP3Q658K8 133 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 KANK3Q6NY19 840 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 DAW1Q8N136 415 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 SNX29Q8TEQ0 813 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 KLHL5Q96PQ7 755 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 HERC2P3Q9BVR0 1158 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 APOL6Q9BWW8 343 aa12.21□□□□□ -0.45
SSBP3-206ENST00000420121 DDX19AQ9NUU7 478 aaKnown RBP12.21□□□□□ -0.45
SSBP3-206ENST00000420121 PRG3Q9Y2Y8 225 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-206ENST00000420121 CITO14578 2027 aa12.21□□□□□ -0.46
SSBP3-206ENST00000420121 LAD1O00515 517 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 PTGESO14684 152 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 SOD2P04179 222 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 PRKCBP05771 671 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 CNPP09543 421 aaKnown RBP12.2□□□□□ -0.46
SSBP3-206ENST00000420121 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 NCBP1Q09161 790 aaKnown RBP12.2□□□□□ -0.46
SSBP3-206ENST00000420121 MAPK7Q13164 816 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 GIT2Q14161 759 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 NAB2Q15742 525 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 ZBTB8OSQ8IWT0 167 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 C12orf76Q8N812 135 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-206ENST00000420121 RPGRIP1Q96KN7 1286 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 FAM193BQ96PV7 902 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-206ENST00000420121 TRIM6Q9C030 488 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-206ENST00000420121 C2orf40Q9H1Z8 148 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 KLK14Q9P0G3 267 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 DOCK8Q8NF50 2099 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 DOCK6Q96HP0 2047 aa12.2□□□□□ -0.46
SSBP3-206ENST00000420121 ACKR2O00590 384 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSBP3-206ENST00000420121 WEE2P0C1S8 567 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 CA8P35219 290 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 OR1G1P47890 313 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 CLCN4P51793 760 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 ITIH3Q06033 890 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 GRIK3Q13003 919 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 MAPK6Q16659 721 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 RILPL1Q5EBL4 403 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 HYIQ5T013 277 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 NT5DC1Q5TFE4 455 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 TAS1R3Q7RTX0 852 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 EDAQ92838 391 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 GPR62Q9BZJ7 368 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 STK39Q9UEW8 545 aa12.19□□□□□ -0.46
SSBP3-206ENST00000420121 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 N4BP3O15049 544 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RECQL4O94761 1208 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 MCM2P49736 904 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 ZXDAP98168 799 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 DSG1Q02413 1049 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 PRPF4BQ13523 1007 aaKnown RBP12.18□□□□□ -0.46
SSBP3-206ENST00000420121 BMS1Q14692 1282 aaKnown RBP12.18□□□□□ -0.46
SSBP3-206ENST00000420121 PPP2R5AQ15172 486 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RARS2Q5T160 578 aaKnown RBP12.18□□□□□ -0.46
SSBP3-206ENST00000420121 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 HFE2Q6ZVN8 426 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 C1orf186Q6ZWK4 172 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 LRRC15Q8TF66 581 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 KIFAP3Q92845 792 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RPS6KC1Q96S38 1066 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 DZANK1Q9NVP4 752 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 SNTG2Q9NY99 539 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 PARP2Q9UGN5 583 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 KIF3AQ9Y496 699 aa12.18□□□□□ -0.46
SSBP3-206ENST00000420121 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-206ENST00000420121 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
SSBP3-206ENST00000420121 C2CD2LO14523 706 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms