RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NLRX1Q86UT6 975 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 GATAD2BQ8WXI9 593 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 KAT2BQ92831 832 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 IL17RAQ96F46 866 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF274Q96GC6 653 aaPredicted RBP7.89□□□□□ -1.15
HMGN1-205ENST00000419378 PGBD1Q96JS3 809 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 SLC26A6Q9BXS9 759 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 RNF26Q9BY78 433 aaPredicted RBP7.89□□□□□ -1.15
HMGN1-205ENST00000419378 ANO3Q9BYT9 981 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 BCAS3Q9H6U6 928 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 EHMT1Q9H9B1 1298 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 MLXIPQ9HAP2 919 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 TMEM260Q9NX78 707 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 MYH7BA7E2Y1 1941 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 DOCK5Q9H7D0 1870 aa7.89□□□□□ -1.15
HMGN1-205ENST00000419378 COL6A3P12111 3177 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 ESYT2A0FGR8 921 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 PIK3R2O00459 728 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 NOP56O00567 594 aaKnown RBP7.88□□□□□ -1.15
HMGN1-205ENST00000419378 ADAMTS3O15072 1205 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 ZNF862O60290 1169 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CILPO75339 1184 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 WISP1O95388 367 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 FOSP01100 380 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-205ENST00000419378 SUPT20HL2P0C7V6 817 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CYP2C9P11712 490 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CYP2C18P33260 490 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 SREBF1P36956 1147 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CHMP4BP1P59074 171 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 AKAP17AQ02040 695 aaKnown RBP7.88□□□□□ -1.15
HMGN1-205ENST00000419378 STK3Q13188 491 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 MTMR1Q13613 665 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 NEDD9Q14511 834 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 SHHQ15465 462 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 DUOXA2Q1HG44 320 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 SCARA3Q6AZY7 606 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 SESTD1Q86VW0 696 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 TMEM199Q8N511 208 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CCDC12Q8WUD4 166 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-205ENST00000419378 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
HMGN1-205ENST00000419378 CDHR1Q96JP9 859 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 C16orf70Q9BSU1 422 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 KATNAL1Q9BW62 490 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 ZMYND12Q9H0C1 365 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 WNT8AQ9H1J5 351 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 HIPK3Q9H422 1215 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 JADE2Q9NQC1 790 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 KRT82Q9NSB4 513 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 TPCN1Q9ULQ1 816 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 UBIAD1Q9Y5Z9 338 aa7.88□□□□□ -1.15
HMGN1-205ENST00000419378 TANC1Q9C0D5 1861 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 EYSQ5T1H1 3165 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 HAS3O00219 553 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CPLX1O14810 134 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 ATP9AO75110 1047 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 PPFIA4O75335 1185 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 LGALS2P05162 132 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CSF2RAP15509 400 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 KCNA2P16389 499 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 ATF4P18848 351 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-205ENST00000419378 AK2P54819 239 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CCL23P55773 120 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 SCRN1Q12765 414 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 PPIGQ13427 754 aaKnown RBP eCLIP7.87□□□□□ -1.155e-19■■□□□ 12
HMGN1-205ENST00000419378 SF3A1Q15459 793 aaKnown RBP7.87□□□□□ -1.15
HMGN1-205ENST00000419378 PTGISQ16647 500 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 KIAA0753Q2KHM9 967 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 SEZ6Q53EL9 994 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 JAKMIP3Q5VZ66 844 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 REXO1Q8N1G1 1221 aaKnown RBP7.87□□□□□ -1.15
HMGN1-205ENST00000419378 BEND7Q8N7W2 519 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-205ENST00000419378 C7orf31Q8N865 590 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 GIMAP8Q8ND71 665 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CCDC148Q8NFR7 591 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 NKD1Q969G9 470 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 DRC1Q96MC2 740 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 CTAGE1Q96RT6 745 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 GPR20Q99678 358 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 SENP7Q9BQF6 1050 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 MXRA8Q9BRK3 442 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 ALG1Q9BT22 464 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 C6orf50Q9HD87 102 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 VPS54Q9P1Q0 977 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 HDAC6Q9UBN7 1215 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 GTF2IRD1Q9UHL9 959 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 TELO2Q9Y4R8 837 aa7.87□□□□□ -1.15
HMGN1-205ENST00000419378 PFKFB2O60825 505 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 DEXIO95424 95 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 BPNT1O95861 308 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 ACRP10323 421 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 SELPP16109 830 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 GNA11P29992 359 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 SP4Q02446 784 aa7.86□□□□□ -1.15
HMGN1-205ENST00000419378 SSRP1Q08945 709 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms