RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SSTR3P32745 418 aaPredicted RBP18.15■□□□□ 0.5
LINC00404-201ENST00000418660 CA8P35219 290 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 OR1G1P47890 313 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 NPTX2P47972 431 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 ZP2Q05996 745 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 MAPK7Q13164 816 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
LINC00404-201ENST00000418660 TMEM119Q4V9L6 283 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 GSTCDQ8NEC7 633 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 PLIN2Q99541 437 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 VN1R3Q9BXE9 311 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 KLK14Q9P0G3 267 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 USP20Q9Y2K6 914 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 PHLPP2Q6ZVD8 1323 aa18.15■□□□□ 0.5
LINC00404-201ENST00000418660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 CLASP2O75122 1294 aaKnown RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 SSBP05455 408 aaKnown RBP eCLIP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 PLA2G4BP0C869 781 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 LONP1P36776 959 aaKnown RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 UBA7P41226 1012 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 SLC12A3P55017 1021 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 GRIK3Q13003 919 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 DMP1Q13316 513 aaPredicted RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 NT5DC1Q5TFE4 455 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 EEF1DP3Q658K8 133 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 ANKRD54Q6NXT1 300 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 LLGL2Q6P1M3 1020 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 AUTS2Q8WXX7 1259 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 CASP10Q92851 521 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 CALML4Q96GE6 196 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 TMEM134Q9H6X4 195 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 KMT5AQ9NQR1 393 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 MARCH5Q9NX47 278 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 KCNG1Q9UIX4 513 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 PRG3Q9Y2Y8 225 aaPredicted RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.49
LINC00404-201ENST00000418660 BDP1A6H8Y1 2624 aa18.14■□□□□ 0.49
LINC00404-201ENST00000418660 HOXB8P17481 243 aaPredicted RBP18.13■□□□□ 0.49
LINC00404-201ENST00000418660 RESTQ13127 1097 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 DCAF4L1Q3SXM0 396 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 ATF7IP2Q5U623 682 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 APBB1IPQ7Z5R6 666 aaPredicted RBP18.13■□□□□ 0.49
LINC00404-201ENST00000418660 TMEM87AQ8NBN3 555 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 KHSRPQ92945 711 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC00404-201ENST00000418660 NTPCRQ9BSD7 190 aaKnown RBP18.13■□□□□ 0.49
LINC00404-201ENST00000418660 COLEC11Q9BWP8 271 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 SNTG2Q9NY99 539 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 ARHGAP28Q9P2N2 729 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 USP15Q9Y4E8 981 aaPredicted RBP18.13■□□□□ 0.49
LINC00404-201ENST00000418660 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 HCFC2Q9Y5Z7 792 aa18.13■□□□□ 0.49
LINC00404-201ENST00000418660 NCOR1O75376 2440 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 SFI1A8K8P3 1242 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 GRIN1Q05586 938 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 PTPN14Q15678 1187 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 SPIRE2Q8WWL2 714 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 SNX21Q969T3 373 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 C1QTNF1Q9BXJ1 281 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 S1PR5Q9H228 398 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 EPHX3Q9H6B9 360 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 TNFSF13BQ9Y275 285 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 CLIC4Q9Y696 253 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 MUC3AQ02505 3323 aa18.12■□□□□ 0.49
LINC00404-201ENST00000418660 PI4K2BG5E9Z4 385 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 LILRB3O75022 631 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 RECQL4O94761 1208 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 EFEMP2O95967 443 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 SOD2P04179 222 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 PLS3P13797 630 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 RAD51AP2Q09MP3 1159 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 PTPAQ15257 358 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 SYCE2Q6PIF2 218 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 SUSD6Q92537 303 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
LINC00404-201ENST00000418660 HERC2P3Q9BVR0 1158 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 EMILIN2Q9BXX0 1053 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 MRPL4Q9BYD3 311 aaKnown RBP18.11■□□□□ 0.49
LINC00404-201ENST00000418660 MRPL17Q9NRX2 175 aaKnown RBP18.11■□□□□ 0.49
LINC00404-201ENST00000418660 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 SSX2IPQ9Y2D8 614 aa18.11■□□□□ 0.49
LINC00404-201ENST00000418660 PTGESO14684 152 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 SLC16A4O15374 487 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 THP07101 528 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 SMTNP53814 917 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 TUSC3Q13454 348 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 ARSHQ5FYA8 562 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 TAS1R3Q7RTX0 852 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 PPFIBP1Q86W92 1011 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 RNF168Q8IYW5 571 aaPredicted RBP18.1■□□□□ 0.49
LINC00404-201ENST00000418660 SLC22A17Q8WUG5 538 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 KLHL5Q96PQ7 755 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
LINC00404-201ENST00000418660 PTPRHQ9HD43 1115 aa18.1■□□□□ 0.49
LINC00404-201ENST00000418660 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms