RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 C2CD6Q53TS8 623 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 CCDC137Q6PK04 289 aaKnown RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 CENPUQ71F23 418 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 FAF2Q96CS3 445 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 FAM118BQ9BPY3 351 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.09□□□□□ -0.15
BDNF-208ENST00000418212 SLITRK6Q9H5Y7 841 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 FZD1Q9UP38 647 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 PIN4Q9Y237 131 aaKnown RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 PLS3P13797 630 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 TBXAS1P24557 533 aaPredicted RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 SCYL3Q8IZE3 742 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 BEST2Q8NFU1 509 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 CYTH3O43739 400 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 GPC4O75487 556 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 WEE2P0C1S8 567 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 SMARCA1P28370 1054 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 NCOA4Q13772 614 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 FAM133BQ5BKY9 247 aaKnown RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 NOA1Q8NC60 698 aaKnown RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 RIN2Q8WYP3 895 aaPredicted RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 HAUS2Q9NVX0 235 aa14.09□□□□□ -0.15
BDNF-208ENST00000418212 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.09□□□□□ -0.15
BDNF-208ENST00000418212 GRAP2O75791 330 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 SHMT1P34896 483 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 PEX19P40855 299 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 EMC2Q15006 297 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 STK33Q9BYT3 514 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 EHD2Q9NZN4 543 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 ASB14A6NK59 587 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 MOCS2O96007 188 aaPredicted RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 CALB1P05937 261 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 MAGOHP61326 146 aaKnown RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 PSMC6P62333 389 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 PRPSAP1Q14558 356 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 PACS2Q86VP3 889 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 DNAAF5Q86Y56 855 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 RBM41Q96IZ5 413 aaKnown RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 DHX35Q9H5Z1 703 aaKnown RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 MAP1BP46821 2468 aaKnown RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 A0A087X0T9 212 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 PGK2P07205 417 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 FAM228BP0C875 321 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 GPS1Q13098 491 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 TFDP2Q14188 446 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 ILDR1Q86SU0 546 aaPredicted RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 SYT2Q8N9I0 419 aaPredicted RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 SLC35G2Q8TBE7 412 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 KBTBD4Q9NVX7 518 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 KLHL8Q9P2G9 620 aaPredicted RBP14.08□□□□□ -0.16
BDNF-208ENST00000418212 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
BDNF-208ENST00000418212 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 TOM1L1O75674 476 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 PDGFRBP09619 1106 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 GNAT1P11488 350 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 EFNA5P52803 228 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 BCAR1P56945 870 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 NME3Q13232 169 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 CCDC38Q502W7 563 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 OR6J1Q8NGC5 347 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 NUDT12Q9BQG2 462 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 PCDHAC2Q9Y5I4 1007 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 URB1O60287 2271 aaKnown RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 SSU72P8A0A1W2PR75 194 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 KCNJ1P48048 391 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 CDH6P55285 790 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 SLC16A10Q8TF71 515 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 IL1R1P14778 569 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 GCKP35557 465 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 ARHGEF6Q15052 776 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 N4BP2L2Q92802 583 aaPredicted RBP14.07□□□□□ -0.16
BDNF-208ENST00000418212 TTC17Q96AE7 1141 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 CBWD1Q9BRT8 395 aa14.07□□□□□ -0.16
BDNF-208ENST00000418212 RASA4BC9J798 803 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 RASA4O43374 803 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 CSDE1O75534 798 aaKnown RBP14.06□□□□□ -0.16
BDNF-208ENST00000418212 ELF1P32519 619 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 HUNKP57058 714 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 RHOT1Q8IXI2 618 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 MICAL1Q8TDZ2 1067 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 PIK3R5Q8WYR1 880 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 KLHL29Q96CT2 875 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 ACAP3Q96P50 834 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 AGPAT3Q9NRZ7 376 aa14.06□□□□□ -0.16
BDNF-208ENST00000418212 LRRC4BQ9NT99 713 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms