RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 A0A1W2PQH9 124 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 J3QKU1 62 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 KCNK5O95279 499 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PRB1P04280 392 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 MYL3P08590 195 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 LINC00271P0C7V0 271 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 HSPA5P11021 654 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 FGFR2P21802 821 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PTGS1P23219 599 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 STAT3P40763 770 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PLCD1P51178 756 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 LIMK1P53667 647 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 CSRP2Q16527 193 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PTGISQ16647 500 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 DDR2Q16832 855 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 LAIR1Q6GTX8 287 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 SASS6Q6UVJ0 657 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ATF7IPQ6VMQ6 1270 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF662Q6ZS27 426 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF605Q86T29 641 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC144CPQ8IYA2 1237 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 DTWD1Q8N5C7 304 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 FAM133AQ8N9E0 248 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ZBTB44Q8NCP5 570 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 VN1R2Q8NFZ6 395 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 TOP1MTQ969P6 601 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 RUNDC1Q96C34 613 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 IL17RAQ96F46 866 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PPP1R9BQ96SB3 815 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 CDCA3Q99618 268 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 IFIH1Q9BYX4 1025 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 POMKQ9H5K3 350 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 TLE6Q9H808 572 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ZSCAN32Q9NX65 697 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 FEZ2Q9UHY8 353 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ADAMTS8Q9UP79 889 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 WASF3Q9UPY6 502 aa6.35□□□□□ -1.39
ECHDC1-206ENST00000417628 ADGRA3Q8IWK6 1321 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 SLC22A31A6NKX4 558 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 LAMTOR5O43504 91 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 C1QL1O75973 258 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 WISP1O95388 367 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 HLA-DOAP06340 250 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC172P0C7W6 258 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 CKBP12277 381 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 PLCG1P19174 1290 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 DNAJB1P25685 340 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 PPP2R1AP30153 589 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TECP42680 631 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 MTA1Q13330 715 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 OS9Q13438 667 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TDGQ13569 410 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 LRRC24Q50LG9 513 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TMEM201Q5SNT2 666 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TMEM63BQ5T3F8 832 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 SPTY2D1Q68D10 685 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 ANKRD54Q6NXT1 300 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 P2RX5Q93086 422 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 TRIM11Q96F44 468 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 FGD4Q96M96 766 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 CLMPQ9H6B4 373 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 ABCF2Q9UG63 623 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 SIT1Q9Y3P8 196 aa6.34□□□□□ -1.39
ECHDC1-206ENST00000417628 MICAL3Q7RTP6 2002 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 CEP295Q9C0D2 2601 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ZNFX1Q9P2E3 1918 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 FLT1P17948 1338 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 EMSYQ7Z589 1322 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 IGF2RP11717 2491 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 KRBA1A5PL33 1030 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ELL2O00472 640 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 WDR46O15213 610 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 RETP07949 1114 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 MMP3P08254 477 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 HOXB8P17481 243 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 TMPOP42166 694 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 CPT1AP50416 773 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 GSTO1P78417 241 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 MECOMQ03112 1051 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 CSTF1Q05048 431 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 DUSP6Q16828 381 aa6.33□□□□□ -1.4
ECHDC1-206ENST00000417628 ABCB5Q2M3G0 1257 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms