RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 TEX28O15482 410 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 URODP06132 367 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 SPATA31D3P0C874 917 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 KIAA0319Q5VV43 1072 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 SPATA31D4Q6ZUB0 917 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 RNF168Q8IYW5 571 aaPredicted RBP17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 ZDHHC14Q8IZN3 488 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 BSNDQ8WZ55 320 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 NFKBIZQ9BYH8 718 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 GPR62Q9BZJ7 368 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 CXCL16Q9H2A7 254 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 SFXN1Q9H9B4 322 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 GIT1Q9Y2X7 761 aa17.29■□□□□ 0.36
RHBDF1-202ENST00000417043 GLUD2P49448 558 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 C8orf76Q96K31 380 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 MAN1C1Q9NR34 630 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 CACNA1HO95180 2353 aa17.28■□□□□ 0.36
RHBDF1-202ENST00000417043 MTCL1Q9Y4B5 1905 aaKnown RBP17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 USP34Q70CQ2 3546 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 RFPL2O75678 378 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 PTPN5P54829 565 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 DSG1Q02413 1049 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 NBR1Q14596 966 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 PADI6Q6TGC4 694 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 GLYCTKQ8IVS8 523 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 UBALD2Q8IYN6 164 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 COLEC11Q9BWP8 271 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 USTQ9Y2C2 406 aa17.27■□□□□ 0.36
RHBDF1-202ENST00000417043 CCDC195A0A1B0GUA6 201 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 EDN1P05305 212 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 ADH1AP07327 375 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 RPL17P18621 184 aaKnown RBP17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 LIG1P18858 919 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 ECM1Q16610 540 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 CCDC149Q6ZUS6 474 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 HACE1Q8IYU2 909 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 FZD8Q9H461 694 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 RXFP1Q9HBX9 757 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 SNTG2Q9NY99 539 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
RHBDF1-202ENST00000417043 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 NR1I2O75469 434 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 RPA1P27694 616 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 TTC38Q5R3I4 469 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 CDCA2Q69YH5 1023 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 C4orf32Q8N8J7 132 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 TMEM105Q8N8V8 129 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 FBXO18Q8NFZ0 1043 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 HASPINQ8TF76 798 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 ACSF2Q96CM8 615 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 FOXP1Q9H334 677 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 PDZD7Q9H5P4 517 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 SSX2IPQ9Y2D8 614 aa17.25■□□□□ 0.35
RHBDF1-202ENST00000417043 ARHGEF35A5YM69 484 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 CASTOR2A6NHX0 329 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 H0Y858 1186 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 GLUD1P00367 558 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 CYP11B2P19099 503 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 GRIK3Q13003 919 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 TMEM132AQ24JP5 1023 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 PRSS55Q6UWB4 352 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 OTOP3Q7RTS5 596 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 ZBTB8OSQ8IWT0 167 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 RIN2Q8WYP3 895 aaPredicted RBP17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 KIF2CQ99661 725 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 PRRX2Q99811 253 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 LLPHQ9BRT6 129 aaKnown RBP17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 KIFC3Q9BVG8 833 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 ADAM28Q9UKQ2 775 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 DOCK8Q8NF50 2099 aa17.24■□□□□ 0.35
RHBDF1-202ENST00000417043 TGM5O43548 720 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 TADA2AO75478 443 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 PRKCBP05771 671 aa17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 IGFBP6P24592 240 aaPredicted RBP17.23■□□□□ 0.35
RHBDF1-202ENST00000417043 CCT6AP40227 531 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms