RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 DRC1Q96MC2 740 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 KIFC3Q9BVG8 833 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 STRA6Q9BX79 667 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 DHX33Q9H6R0 707 aaKnown RBP10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 LMCD1Q9NZU5 365 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 MTUS1Q9ULD2 1270 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 PADI3Q9ULW8 664 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 PCDHB7Q9Y5E2 793 aa10.1□□□□□ -0.79
CHRNA1-206ENST00000416004 KCNJ18B7U540 433 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 ENPP3O14638 875 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 EIF3DO15371 548 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 GAS2O43903 313 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 UBASH3AP57075 661 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 DRP2Q13474 957 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 KCNJ12Q14500 433 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 KNOP1Q1ED39 458 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 AAK1Q2M2I8 961 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 KIZQ2M2Z5 673 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 TCP11X2Q5H9J9 407 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 TMCO2Q7Z6W1 182 aaPredicted RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 NPAS4Q8IUM7 802 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 TMEM143Q96AN5 459 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 ZBTB10Q96DT7 871 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 OSMRQ99650 979 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 TIPINQ9BVW5 301 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 THAP9Q9H5L6 903 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 ATP6V0A4Q9HBG4 840 aa10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 LARSQ9P2J5 1176 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 LIMA1Q9UHB6 759 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-206ENST00000416004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 LINC01553A4QN01 128 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 K7ENM7 598 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 SLC16A4O15374 487 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TGFB1I1O43294 461 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 VTNP04004 478 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 IBSPP21815 317 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 CDC25BP30305 580 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 RFC5P40937 340 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 NPTX2P47972 431 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 CLCN3P51790 818 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 NLRP11P59045 1033 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ERVK-21P61565 698 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 BTG3Q14201 252 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 SPOUT1Q5T280 376 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 FOXR2Q6PJQ5 311 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 LRRC71Q8N4P6 559 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ASAP3Q8TDY4 903 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 PPP1R16BQ96T49 567 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 GCOM2Q9BZD3 368 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TAB2Q9NYJ8 693 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ADGRA3Q8IWK6 1321 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 A0A1B0GTH6 734 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TEX33O43247 280 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 HOXA2O43364 376 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 SFPQP23246 707 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 COPB1P53618 953 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 NCKAP1LP55160 1127 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 NR1I3Q14994 352 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 HAUS6Q7Z4H7 955 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 NOC3LQ8WTT2 800 aaKnown RBP10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 KIFAP3Q92845 792 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TSG101Q99816 390 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 AAASQ9NRG9 546 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 THEGQ9P2T0 379 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 ST3GAL5Q9UNP4 418 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 TRAF3IP3Q9Y228 551 aa10.08□□□□□ -0.8
CHRNA1-206ENST00000416004 LCHNA4D1U4 455 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 LRRC10BA6NIK2 292 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 CCDC169A6NNP5 214 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 TISP43B9A030 160 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 MAFO75444 373 aaPredicted RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 RB1P06400 928 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 MAPTP10636 758 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 GLRA2P23416 452 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 EIF4BP23588 611 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 CTNNB1P35222 781 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 ARL2P36404 184 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 NCBP1Q09161 790 aaKnown RBP10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 SLC24A5Q71RS6 500 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 ZNF410Q86VK4 478 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 DRC7Q8IY82 874 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 ABI1Q8IZP0 508 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
CHRNA1-206ENST00000416004 SP7Q8TDD2 431 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms