RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 RPS6KC1Q96S38 1066 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 POLR3FQ9H1D9 316 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 DZANK1Q9NVP4 752 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 DBR1Q9UK59 544 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 PRG3Q9Y2Y8 225 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 CFAP54Q96N23 3096 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 VWA8A3KMH1 1905 aa13.8□□□□□ -0.2
NCKIPSD-203ENST00000415281 PTGESO14684 152 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 ST18O60284 1047 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 ERLIN2O94905 339 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 NPTXRO95502 500 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 MYBP10242 640 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 KLRC2P26717 231 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 MCM7P33993 719 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 CA8P35219 290 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 OR1G1P47890 313 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 ZNF174Q15697 407 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 CDCA2Q69YH5 1023 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 ZNF707Q96C28 371 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 POLR3CQ9BUI4 534 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 UBN1Q9NPG3 1134 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 KLK14Q9P0G3 267 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 GIT1Q9Y2X7 761 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 NR2E1Q9Y466 385 aa13.79□□□□□ -0.2
NCKIPSD-203ENST00000415281 CARNS1A5YM72 827 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 C2CD2LO14523 706 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 RFPL2O75678 378 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 NPR3P17342 541 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 DSG1Q02413 1049 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 NBR1Q14596 966 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 IL17AQ16552 155 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 FAM187BQ17R55 369 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 EEF1DP3Q658K8 133 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 CMASQ8NFW8 434 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 SFXN1Q9H9B4 322 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 NOTCH4Q99466 2003 aa13.78□□□□□ -0.2
NCKIPSD-203ENST00000415281 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 CYP11B2P19099 503 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 RPA1P27694 616 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 TFDP1Q14186 410 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 WDR87Q6ZQQ6 2873 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 C15orf39Q6ZRI6 1047 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 CABP7Q86V35 215 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 FAM193BQ96PV7 902 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 MAN1C1Q9NR34 630 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 FAM86C1Q9NVL1 165 aa13.77□□□□□ -0.21
NCKIPSD-203ENST00000415281 CCDC195A0A1B0GUA6 201 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 GLUD2P49448 558 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 RTP2Q5QGT7 225 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 UBALD2Q8IYN6 164 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 NACC1Q96RE7 527 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 LLPHQ9BRT6 129 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 RHOBTB2Q9BYZ6 727 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 SNTG2Q9NY99 539 aa13.76□□□□□ -0.21
NCKIPSD-203ENST00000415281 CACNA1HO95180 2353 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 ZMYM2Q9UBW7 1377 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 MEFVO15553 781 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 ADAM12O43184 909 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 TGM5O43548 720 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 PI15O43692 258 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 NARSO43776 548 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 PTPN5P54829 565 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 CWF19L1Q69YN2 538 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 PRSS55Q6UWB4 352 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
NCKIPSD-203ENST00000415281 DAW1Q8N136 415 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms