RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 BCAR1P56945 870 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 KRT17Q04695 432 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 E2F4Q16254 413 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 ADALQ6DHV7 355 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 TCHPQ9BT92 498 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 MAGEF1Q9HAY2 307 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 SEL1LQ9UBV2 794 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 PUF60Q9UHX1 559 aaKnown RBP27.77■■■□□ 2.04
CPNE1-207ENST00000414664 TRANK1O15050 2925 aa27.77■■■□□ 2.04
CPNE1-207ENST00000414664 PRRC2BQ5JSZ5 2229 aaKnown RBP27.76■■■□□ 2.04
CPNE1-207ENST00000414664 ZC3H11AO75152 810 aaKnown RBP eCLIP27.76■■■□□ 2.03
CPNE1-207ENST00000414664 PLCB3Q01970 1234 aa27.76■■■□□ 2.03
CPNE1-207ENST00000414664 ZPBP2Q6X784 338 aa27.76■■■□□ 2.03
CPNE1-207ENST00000414664 POF1BQ8WVV4 589 aa27.76■■■□□ 2.03
CPNE1-207ENST00000414664 GBP3Q9H0R5 595 aa27.76■■■□□ 2.03
CPNE1-207ENST00000414664 NRDE2Q9H7Z3 1164 aa27.76■■■□□ 2.03
CPNE1-207ENST00000414664 POLR2DO15514 142 aaKnown RBP27.75■■■□□ 2.03
CPNE1-207ENST00000414664 POMCP01189 267 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 ANP32AP39687 249 aaKnown RBP27.75■■■□□ 2.03
CPNE1-207ENST00000414664 ZNF568Q3ZCX4 644 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 DNAJC19Q96DA6 116 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 RPS6KC1Q96S38 1066 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 TMEM175Q9BSA9 504 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 PTPRHQ9HD43 1115 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 KBTBD4Q9NVX7 518 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 SNTG2Q9NY99 539 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 KCNH3Q9ULD8 1083 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 LZTS1Q9Y250 596 aa27.75■■■□□ 2.03
CPNE1-207ENST00000414664 TOM1L1O75674 476 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 MCF2P10911 925 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 IDEP14735 1019 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 CMA1P23946 247 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 AFF1P51825 1210 aaKnown RBP27.74■■■□□ 2.03
CPNE1-207ENST00000414664 SKIV2LQ15477 1246 aaKnown RBP27.74■■■□□ 2.03
CPNE1-207ENST00000414664 MPZL3Q6UWV2 235 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 SLC39A11Q8N1S5 342 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 MRPS27Q92552 414 aaKnown RBP27.74■■■□□ 2.03
CPNE1-207ENST00000414664 BICD1Q96G01 975 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 CHAMP1Q96JM3 812 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 ST6GALNAC4Q9H4F1 302 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 NSUN3Q9H649 340 aaKnown RBP27.74■■■□□ 2.03
CPNE1-207ENST00000414664 TBX20Q9UMR3 447 aa27.74■■■□□ 2.03
CPNE1-207ENST00000414664 ALDH2P05091 517 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 GALTP07902 379 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 PROZP22891 400 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 PBX3P40426 434 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 SCNN1GP51170 649 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 GTF2BQ00403 316 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 SFR1Q86XK3 245 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 ZNF280BQ86YH2 543 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 CCDC65Q8IXS2 484 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 ZFP42Q96MM3 310 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 CCDC94Q9BW85 323 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-207ENST00000414664 CDT1Q9H211 546 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 KLK14Q9P0G3 267 aa27.73■■■□□ 2.03
CPNE1-207ENST00000414664 NR1I2O75469 434 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 DDHD2O94830 711 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 NMT1P30419 496 aaKnown RBP27.72■■■□□ 2.03
CPNE1-207ENST00000414664 HERC4Q5GLZ8 1057 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-207ENST00000414664 PDE12Q6L8Q7 609 aaKnown RBP27.72■■■□□ 2.03
CPNE1-207ENST00000414664 ZBTB33Q86T24 672 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 PPP2R3CQ969Q6 453 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 TMEM169Q96HH4 297 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 FIZ1Q96SL8 496 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 MRPL44Q9H9J2 332 aaKnown RBP27.72■■■□□ 2.03
CPNE1-207ENST00000414664 TLR9Q9NR96 1032 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 PANK4Q9NVE7 773 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 MIOSQ9NXC5 875 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 GDAQ9Y2T3 454 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 COL6A3P12111 3177 aa27.72■■■□□ 2.03
CPNE1-207ENST00000414664 TCHHQ07283 1943 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 CLDN3O15551 220 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 RECQL4O94761 1208 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 DNAJB1P25685 340 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 GRM5P41594 1212 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 LIG4P49917 911 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 YARSP54577 528 aaKnown RBP27.71■■■□□ 2.03
CPNE1-207ENST00000414664 GRIK3Q13003 919 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 CAMK1Q14012 370 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 ZNF720Q7Z2F6 126 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 CEP57L1Q8IYX8 460 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 MICAL1Q8TDZ2 1067 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 STAMQ92783 540 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 HVCN1Q96D96 273 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 TOPORSQ9NS56 1045 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-207ENST00000414664 DNAJB4Q9UDY4 337 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 CIZ1Q9ULV3 898 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-207ENST00000414664 FAN1Q9Y2M0 1017 aa27.71■■■□□ 2.03
CPNE1-207ENST00000414664 FRMD3A2A2Y4 597 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 NT5C1B-RDH14C9J2C7 533 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 HNRNPDLO14979 420 aaKnown RBP27.7■■■□□ 2.02
CPNE1-207ENST00000414664 PIGRP01833 764 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 MATR3P43243 847 aaKnown RBP eCLIP27.7■■■□□ 2.02
CPNE1-207ENST00000414664 SLC11A1P49279 550 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 NOLC1Q14978 699 aaKnown RBP eCLIP27.7■■■□□ 2.023e-8■□□□□ 8.2
CPNE1-207ENST00000414664 GSTCDQ8NEC7 633 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 TRIM9Q9C026 710 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 OLFML3Q9NRN5 406 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 ANKFY1Q9P2R3 1169 aa27.7■■■□□ 2.02
CPNE1-207ENST00000414664 STK39Q9UEW8 545 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms