RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CABP7Q86V35 215 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 RIPOR3Q96MK2 946 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 NECTIN4Q96NY8 510 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 MRPL17Q9NRX2 175 aaKnown RBP17.2■□□□□ 0.34
ACTB-202ENST00000414620 PRMT7Q9NVM4 692 aaPredicted RBP17.2■□□□□ 0.34
ACTB-202ENST00000414620 NR2E1Q9Y466 385 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 ARIH1Q9Y4X5 557 aaPredicted RBP17.2■□□□□ 0.34
ACTB-202ENST00000414620 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 A0A1B0GUA9 196 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 EDN1P05305 212 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 PRKCBP05771 671 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 CYP11B2P19099 503 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 TRAPPC10P48553 1259 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
ACTB-202ENST00000414620 CLCN4P51793 760 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 PTPN21Q16825 1174 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 GSTCDQ8NEC7 633 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 RPS6KC1Q96S38 1066 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 SFXN1Q9H9B4 322 aa17.19■□□□□ 0.34
ACTB-202ENST00000414620 CITO14578 2027 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 LILRB3O75022 631 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 GLUD2P49448 558 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTB-202ENST00000414620 GRIK3Q13003 919 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 PTGDRQ13258 359 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 MFSD14AQ96MC6 490 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 FZD8Q9H461 694 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 PDZD7Q9H5P4 517 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
ACTB-202ENST00000414620 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
ACTB-202ENST00000414620 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 N4BP3O15049 544 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 NR1I2O75469 434 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.343e-17■□□□□ 9.4
ACTB-202ENST00000414620 SIGLEC14Q08ET2 396 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 PRPF4BQ13523 1007 aaKnown RBP17.17■□□□□ 0.34
ACTB-202ENST00000414620 RABEP1Q15276 862 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 MAPK6Q16659 721 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 FAM187BQ17R55 369 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 ATAT1Q5SQI0 421 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 FUT10Q6P4F1 479 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 GLYCTKQ8IVS8 523 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 RNF168Q8IYW5 571 aaPredicted RBP17.17■□□□□ 0.34
ACTB-202ENST00000414620 TDRD5Q8NAT2 981 aaKnown RBP17.17■□□□□ 0.34
ACTB-202ENST00000414620 HASPINQ8TF76 798 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 MAN1C1Q9NR34 630 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
ACTB-202ENST00000414620 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
ACTB-202ENST00000414620 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 TEX28O15482 410 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 ASGR2P07307 311 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 NAMPTP43490 491 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 EEF1DP3Q658K8 133 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 KREMEN2Q8NCW0 462 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 PAAF1Q9BRP4 392 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 GPR62Q9BZJ7 368 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 CCDC113Q9H0I3 377 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 CXCL16Q9H2A7 254 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 DOCK6Q96HP0 2047 aa17.16■□□□□ 0.34
ACTB-202ENST00000414620 E9PMD0 336 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 ST18O60284 1047 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 RECQL4O94761 1208 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
ACTB-202ENST00000414620 EFEMP2O95967 443 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 ADH1AP07327 375 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 MUTP22033 750 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 CDC25AP30304 524 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 IL17AQ16552 155 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 KIAA0319Q5VV43 1072 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 BMP8AQ7Z5Y6 402 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 GPR149Q86SP6 731 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 SUGP1Q8IWZ8 645 aaKnown RBP17.15■□□□□ 0.34
ACTB-202ENST00000414620 ASIC4Q96FT7 647 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 IFT74Q96LB3 600 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 ADPGKQ9BRR6 497 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 SSX2IPQ9Y2D8 614 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
ACTB-202ENST00000414620 DOCK8Q8NF50 2099 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 ACKR2O00590 384 aa17.14■□□□□ 0.33
ACTB-202ENST00000414620 PTGESO14684 152 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms