RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MOXD1Q6UVY6 613 aa18.37■□□□□ 0.53
PHRF1-202ENST00000413872 SPATA2LQ8IUW3 424 aaPredicted RBP18.37■□□□□ 0.53
PHRF1-202ENST00000413872 DCLK2Q8N568 766 aa18.37■□□□□ 0.53
PHRF1-202ENST00000413872 PPP1R12CQ9BZL4 782 aa18.37■□□□□ 0.53
PHRF1-202ENST00000413872 AGPAT1Q99943 283 aa18.37■□□□□ 0.53
PHRF1-202ENST00000413872 CYP2C9P11712 490 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 RGS2P41220 211 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 PARD6BQ9BYG5 372 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 STK33Q9BYT3 514 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 MROH8Q9H579 483 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 PRDM5Q9NQX1 630 aaPredicted RBP18.36■□□□□ 0.53
PHRF1-202ENST00000413872 CREB3O43889 395 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 RTN2O75298 545 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 RPLP2P05387 115 aaKnown RBP18.36■□□□□ 0.53
PHRF1-202ENST00000413872 MUTP22033 750 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 KRT33BQ14525 404 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 NAA25Q14CX7 972 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 SAYSD1Q9NPB0 183 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 DPYDQ12882 1025 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 KLHL38Q2WGJ6 581 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 GLB1LQ6UWU2 654 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 DRP2Q13474 957 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 SP110Q9HB58 689 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 KCNH7Q9NS40 1196 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 APEX2Q9UBZ4 518 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 CLGNO14967 610 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 CCT5P48643 541 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
PHRF1-202ENST00000413872 RNF180Q86T96 592 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 EPAS1Q99814 870 aa18.36■□□□□ 0.53
PHRF1-202ENST00000413872 P4HA2O15460 535 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 PRMT6Q96LA8 375 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-202ENST00000413872 AGBL1Q96MI9 1066 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 HEMGNQ9BXL5 484 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 EPS15L1Q9UBC2 864 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 PCSK1NQ9UHG2 260 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 TADA2AO75478 443 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 TOM1L1O75674 476 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 ITGA4P13612 1032 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 TROAPQ12815 778 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 SNRNP35Q16560 246 aaKnown RBP18.35■□□□□ 0.53
PHRF1-202ENST00000413872 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 C18orf8Q96DM3 657 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 LBHD1Q9BQE6 289 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-202ENST00000413872 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 SLIT1O75093 1534 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 FAM187AA6NFU0 413 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 FGFR2P21802 821 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 HSD17B4P51659 736 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 C9orf131Q5VYM1 1079 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 RNF25Q96BH1 459 aaPredicted RBP18.35■□□□□ 0.53
PHRF1-202ENST00000413872 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 CYP2C19P33261 490 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 BACE1P56817 501 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 NCOA4Q13772 614 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 EFHBQ8N7U6 833 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 GLT1D1Q96MS3 346 aa18.35■□□□□ 0.53
PHRF1-202ENST00000413872 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.533e-7■■■□□ 16
PHRF1-202ENST00000413872 SKIP12755 728 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 CHMP6Q96FZ7 201 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 DHX35Q9H5Z1 703 aaKnown RBP18.34■□□□□ 0.53
PHRF1-202ENST00000413872 UVRAGQ9P2Y5 699 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 MAD2L2Q9UI95 211 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 NEMP1O14524 444 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 IL1R1P14778 569 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 FMO5P49326 533 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 NNTQ13423 1086 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 ATF7IP2Q5U623 682 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 MED15Q96RN5 788 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 FAM96AQ9H5X1 160 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 TBK1Q9UHD2 729 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 SNX9Q9Y5X1 595 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 SALL1Q9NSC2 1324 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 FAM205CA6NFA0 338 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 PPP1R12AO14974 1030 aaPredicted RBP18.34■□□□□ 0.53
PHRF1-202ENST00000413872 PCSK1P29120 753 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 SNX17Q15036 470 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 GNASQ5JWF2 1037 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 ELOA2Q8IYF1 753 aaPredicted RBP18.34■□□□□ 0.53
PHRF1-202ENST00000413872 ADGRG1Q9Y653 693 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 FOXN1O15353 648 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 ROR1Q01973 937 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 SV2CQ496J9 727 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 TJP2Q9UDY2 1190 aa18.34■□□□□ 0.53
PHRF1-202ENST00000413872 CYBBP04839 570 aa18.33■□□□□ 0.53
PHRF1-202ENST00000413872 SLCO1A2P46721 670 aa18.33■□□□□ 0.53
PHRF1-202ENST00000413872 CC2D1AQ6P1N0 951 aaPredicted RBP18.33■□□□□ 0.53
PHRF1-202ENST00000413872 DCP1BQ8IZD4 617 aaKnown RBP18.33■□□□□ 0.53
PHRF1-202ENST00000413872 SNX24Q9Y343 169 aa18.33■□□□□ 0.53
PHRF1-202ENST00000413872 MYMKA6NI61 221 aa18.33■□□□□ 0.52
PHRF1-202ENST00000413872 AP3B1O00203 1094 aa18.33■□□□□ 0.52
PHRF1-202ENST00000413872 TEX33O43247 280 aa18.33■□□□□ 0.52
PHRF1-202ENST00000413872 DHX40Q8IX18 779 aaKnown RBP18.33■□□□□ 0.52
PHRF1-202ENST00000413872 LSM7Q9UK45 103 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms